RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 LYZL1Q6UWQ5 148 aa19.82■□□□□ 0.76
HOXB3-210ENST00000489475 MCRIP2Q9BUT9 160 aaKnown RBP19.82■□□□□ 0.76
HOXB3-210ENST00000489475 VWFP04275 2813 aa19.82■□□□□ 0.76
HOXB3-210ENST00000489475 TRAV12-2A0A075B6T6 113 aa19.81■□□□□ 0.76
HOXB3-210ENST00000489475 TRAV12-3A0A0B4J271 114 aa19.81■□□□□ 0.76
HOXB3-210ENST00000489475 A0A1B0GXF2 115 aa19.81■□□□□ 0.76
HOXB3-210ENST00000489475 CAMPP49913 170 aa19.81■□□□□ 0.76
HOXB3-210ENST00000489475 IGLC6P0CF74 106 aa19.81■□□□□ 0.76
HOXB3-210ENST00000489475 SHISA2Q6UWI4 295 aa19.81■□□□□ 0.76
HOXB3-210ENST00000489475 TMEM136Q6ZRR5 245 aa19.81■□□□□ 0.76
HOXB3-210ENST00000489475 STHQ8IWL8 128 aa19.81■□□□□ 0.76
HOXB3-210ENST00000489475 PHOX2AO14813 284 aa19.8■□□□□ 0.76
HOXB3-210ENST00000489475 CD7P09564 240 aa19.8■□□□□ 0.76
HOXB3-210ENST00000489475 ARMS2P0C7Q2 107 aa19.8■□□□□ 0.76
HOXB3-210ENST00000489475 RIGQ13278 110 aa19.8■□□□□ 0.76
HOXB3-210ENST00000489475 MUC21Q5SSG8 566 aa19.8■□□□□ 0.76
HOXB3-210ENST00000489475 CLUHP3Q96NS8 147 aa19.8■□□□□ 0.76
HOXB3-210ENST00000489475 CTRLP40313 264 aa19.79■□□□□ 0.76
HOXB3-210ENST00000489475 MRPL18Q9H0U6 180 aaKnown RBP19.79■□□□□ 0.76
HOXB3-210ENST00000489475 RBMY1BA6NDE4 496 aaKnown RBP19.79■□□□□ 0.76
HOXB3-210ENST00000489475 RBMY1EA6NEQ0 496 aaKnown RBP19.79■□□□□ 0.76
HOXB3-210ENST00000489475 HLA-DQA1P01909 254 aa19.79■□□□□ 0.76
HOXB3-210ENST00000489475 RBMY1DP0C7P1 496 aaKnown RBP19.79■□□□□ 0.76
HOXB3-210ENST00000489475 ANXA2RQ3ZCQ2 193 aa19.79■□□□□ 0.76
HOXB3-210ENST00000489475 WFDC9Q8NEX5 89 aa19.79■□□□□ 0.76
HOXB3-210ENST00000489475 ZNF324O75467 553 aaPredicted RBP19.78■□□□□ 0.76
HOXB3-210ENST00000489475 FXYD7P58549 80 aa19.78■□□□□ 0.76
HOXB3-210ENST00000489475 FAM159AQ6UWV7 190 aa19.78■□□□□ 0.76
HOXB3-210ENST00000489475 F2Z2F3 143 aa19.77■□□□□ 0.76
HOXB3-210ENST00000489475 A0A1B0GW15 77 aa19.76■□□□□ 0.75
HOXB3-210ENST00000489475 TRGC1P0CF51 173 aa19.76■□□□□ 0.75
HOXB3-210ENST00000489475 S100A8P05109 93 aa19.76■□□□□ 0.75
HOXB3-210ENST00000489475 KCNS1Q96KK3 526 aa19.76■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BKO60814 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BJP06899 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BOP23527 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BBP33778 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BDP58876 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BCP62807 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST2H2BEQ16778 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BHQ93079 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BNQ99877 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 HIST1H2BMQ99879 126 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 C19orf73Q9NVV2 129 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 NOTCH3Q9UM47 2321 aa19.75■□□□□ 0.75
HOXB3-210ENST00000489475 ASIPP42127 132 aa19.74■□□□□ 0.75
HOXB3-210ENST00000489475 TRPT1Q86TN4 253 aaKnown RBP19.74■□□□□ 0.75
HOXB3-210ENST00000489475 MUC21A0A0G2JKD1 596 aa19.74■□□□□ 0.75
HOXB3-210ENST00000489475 MUC21A0A140T8X8 626 aa19.74■□□□□ 0.75
HOXB3-210ENST00000489475 S100A4P26447 101 aaKnown RBP19.74■□□□□ 0.75
HOXB3-210ENST00000489475 SSTP61278 116 aa19.74■□□□□ 0.75
HOXB3-210ENST00000489475 CRXO43186 299 aaPredicted RBP19.72■□□□□ 0.75
HOXB3-210ENST00000489475 APCSP02743 223 aa19.72■□□□□ 0.75
HOXB3-210ENST00000489475 S100A6P06703 90 aa19.72■□□□□ 0.75
HOXB3-210ENST00000489475 OR5AL1P0C617 328 aa19.72■□□□□ 0.75
HOXB3-210ENST00000489475 GTSCR1Q86UQ5 136 aa19.72■□□□□ 0.75
HOXB3-210ENST00000489475 CNFNQ9BYD5 112 aa19.72■□□□□ 0.75
HOXB3-210ENST00000489475 NUTF2P61970 127 aaKnown RBP19.72■□□□□ 0.75
HOXB3-210ENST00000489475 TDRG1Q3Y452 100 aa19.72■□□□□ 0.75
HOXB3-210ENST00000489475 SSBP4Q9BWG4 385 aaPredicted RBP19.72■□□□□ 0.75
HOXB3-210ENST00000489475 WFDC10AQ9H1F0 79 aa19.72■□□□□ 0.75
HOXB3-210ENST00000489475 H3BVH4 76 aa19.71■□□□□ 0.75
HOXB3-210ENST00000489475 GNRH2O43555 120 aa19.71■□□□□ 0.75
HOXB3-210ENST00000489475 AMBPP02760 352 aa19.71■□□□□ 0.75
HOXB3-210ENST00000489475 IGLL1P15814 213 aa19.71■□□□□ 0.75
HOXB3-210ENST00000489475 TWIST1Q15672 202 aa19.71■□□□□ 0.75
HOXB3-210ENST00000489475 NTF3P20783 257 aa19.7■□□□□ 0.74
HOXB3-210ENST00000489475 IGHV1OR15-1A0A075B7D0 117 aa19.69■□□□□ 0.74
HOXB3-210ENST00000489475 SNAI2O43623 268 aa19.69■□□□□ 0.74
HOXB3-210ENST00000489475 SLAQ13239 276 aa19.69■□□□□ 0.74
HOXB3-210ENST00000489475 DNLZQ5SXM8 178 aa19.69■□□□□ 0.74
HOXB3-210ENST00000489475 TIMM8BQ9Y5J9 83 aaPredicted RBP19.69■□□□□ 0.74
HOXB3-210ENST00000489475 STAB1Q9NY15 2570 aa19.69■□□□□ 0.74
HOXB3-210ENST00000489475 INSP01308 110 aa19.68■□□□□ 0.74
HOXB3-210ENST00000489475 MED14OSP0DP75 135 aa19.68■□□□□ 0.74
HOXB3-210ENST00000489475 GATD1Q8NB37 220 aa19.67■□□□□ 0.74
HOXB3-210ENST00000489475 OR10AG1Q8NH19 301 aa19.67■□□□□ 0.74
HOXB3-210ENST00000489475 LOC105371267A0A1B0GV96 52 aa19.67■□□□□ 0.74
HOXB3-210ENST00000489475 RBMY1A1P0DJD3 496 aaKnown RBP19.67■□□□□ 0.74
HOXB3-210ENST00000489475 RBMY1CP0DJD4 496 aa19.67■□□□□ 0.74
HOXB3-210ENST00000489475 CACNG7P62955 275 aa19.67■□□□□ 0.74
HOXB3-210ENST00000489475 RBMY1FQ15415 496 aaKnown RBP19.67■□□□□ 0.74
HOXB3-210ENST00000489475 KIAA1644Q3SXP7 199 aa19.67■□□□□ 0.74
HOXB3-210ENST00000489475 WIPF1O43516 503 aa19.66■□□□□ 0.74
HOXB3-210ENST00000489475 NDUFA6P56556 154 aa19.66■□□□□ 0.74
HOXB3-210ENST00000489475 SPANXN1Q5VSR9 72 aa19.66■□□□□ 0.74
HOXB3-210ENST00000489475 C20orf144Q9BQM9 153 aa19.66■□□□□ 0.74
HOXB3-210ENST00000489475 XCL2Q9UBD3 114 aa19.66■□□□□ 0.74
HOXB3-210ENST00000489475 ZNF493Q6ZR52 646 aa19.65■□□□□ 0.74
HOXB3-210ENST00000489475 PHLDA3Q9Y5J5 127 aa19.65■□□□□ 0.74
HOXB3-210ENST00000489475 COL6A5A8TX70 2615 aa19.65■□□□□ 0.74
HOXB3-210ENST00000489475 RNASE3P12724 160 aaKnown RBP19.65■□□□□ 0.74
HOXB3-210ENST00000489475 PRR31Q5SQ13 230 aa19.65■□□□□ 0.74
HOXB3-210ENST00000489475 DEFB125Q8N687 156 aa19.65■□□□□ 0.74
HOXB3-210ENST00000489475 MSRB1Q9NZV6 116 aa19.65■□□□□ 0.74
HOXB3-210ENST00000489475 TP53TG3Q9ULZ0 132 aa19.65■□□□□ 0.74
HOXB3-210ENST00000489475 Q8N1Y9 231 aa19.64■□□□□ 0.73
HOXB3-210ENST00000489475 SCRT2Q9NQ03 307 aa19.64■□□□□ 0.73
HOXB3-210ENST00000489475 IGHV4-4A0A075B6R2 117 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms