RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SFT2D1Q8WV19 159 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 CC2D2AQ9P2K1 1620 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 PPIP5K1Q6PFW1 1433 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 IGKV2-28A0A075B6P5 120 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 IGKV2D-28P01615 120 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 CTSGP08311 255 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 PDE6HQ13956 83 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 MRPL54Q6P161 138 aaKnown RBP1.82□□□□□ -2.12
PRPF4-203ENST00000488937 TTC9CQ8N5M4 171 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 C5orf17Q8NAS9 161 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 OR4X2Q8NGF9 303 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 TMEM254Q8TBM7 123 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 CYYR1Q96J86 154 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 ABCA3Q99758 1704 aa1.82□□□□□ -2.12
PRPF4-203ENST00000488937 HEATR1Q9H583 2144 aaKnown RBP1.82□□□□□ -2.12
PRPF4-203ENST00000488937 KTN1Q86UP2 1357 aaKnown RBP1.82□□□□□ -2.12
PRPF4-203ENST00000488937 CUL9Q8IWT3 2517 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 MED12LQ86YW9 2145 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 MUC22E2RYF6 1773 aaPredicted RBP1.81□□□□□ -2.12
PRPF4-203ENST00000488937 TCRBV4S1A1TA0A5B7 111 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 C2orf70A6NJV1 201 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 OOSP1A8MZH6 123 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 J3QLW9 94 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 APOC4-APOC2K7ER74 178 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 ERC2-IT1O76042 136 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 APOC2P02655 101 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 SPINK8P0C7L1 97 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 IFITM1P13164 125 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 BRS3P32247 399 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 HINT1P49773 126 aaPredicted RBP1.81□□□□□ -2.12
PRPF4-203ENST00000488937 LINC00315P59091 139 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 CNBPP62633 177 aaKnown RBP1.81□□□□□ -2.12
PRPF4-203ENST00000488937 COL5A1-AS1Q5SY13 56 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 OR2T2Q6IF00 324 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 ZNF833PQ6ZTB9 187 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 Q8TAT8 98 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 TIMM21Q9BVV7 248 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 NOP16Q9Y3C1 178 aaKnown RBP1.81□□□□□ -2.12
PRPF4-203ENST00000488937 WNK3Q9BYP7 1800 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 MYH8P13535 1937 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 MED14O60244 1454 aa1.81□□□□□ -2.12
PRPF4-203ENST00000488937 LAMB4A4D0S4 1761 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 PCDH15Q96QU1 1955 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 CASP8AP2Q9UKL3 1982 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 TRAV14DV4A0A0A6YYC5 116 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 TRAV2A0A0B4J234 112 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 TRAV10A0A0B4J240 114 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 A0A0G2JQZ4 141 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 C3orf85A0A1B0GTC6 90 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 IGKV3-11P04433 115 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 MIR22HGQ0VDD5 57 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 C9orf153Q5TBE3 101 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 ZCCHC23Q6ZST2 131 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 SLC25A26Q70HW3 274 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 SPACA4Q8TDM5 124 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 LRP5O75197 1615 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 SIP14410 1827 aa1.8□□□□□ -2.12
PRPF4-203ENST00000488937 PTPRDP23468 1912 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 LOC107984156A0A0G2JMH3 177 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 EDF1O60869 148 aaKnown RBP1.79□□□□□ -2.12
PRPF4-203ENST00000488937 GYPBP06028 91 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 CXCL8P10145 99 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 ADCYAP1P18509 176 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 S100A10P60903 97 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 PRR9Q5T870 116 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 CASC2Q6XLA1 102 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 ARL17AQ8IVW1 177 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 SMIM7Q9BQ49 75 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 DISP1Q96F81 1524 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 KDM5AP29375 1690 aaKnown RBP1.79□□□□□ -2.12
PRPF4-203ENST00000488937 RBBP6Q7Z6E9 1792 aaKnown RBP1.79□□□□□ -2.12
PRPF4-203ENST00000488937 PATJQ8NI35 1801 aa1.79□□□□□ -2.12
PRPF4-203ENST00000488937 SHROOM2Q13796 1616 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 A0A1W2PNN7 141 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 TMEM262E9PQX1 116 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 Q1T7F1 81 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.78□□□□□ -2.12
PRPF4-203ENST00000488937 SVBPQ8N300 66 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 C9orf62Q8N4C0 152 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 Q8N8P6 123 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 DYNLRB2Q8TF09 96 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 AQP10Q96PS8 301 aa1.78□□□□□ -2.12
PRPF4-203ENST00000488937 MDC1Q14676 2089 aaKnown RBP1.78□□□□□ -2.13
PRPF4-203ENST00000488937 CHD3Q12873 2000 aaKnown RBP1.78□□□□□ -2.13
PRPF4-203ENST00000488937 ADGRB3O60242 1522 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 PTPRMP28827 1452 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 TEX14Q8IWB6 1497 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 RTEL1-TNFRSF6BF6WH68 1400 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 BRWD1Q9NSI6 2320 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 A0A1W2PRS3 328 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 TCRBV3S1A0A5B6 114 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 NDUFB6O95139 128 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 IGLV6-57P01721 117 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 IGHV3-33P01772 117 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 PIRTP0C851 137 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 RPL26P61254 145 aaKnown RBP1.77□□□□□ -2.13
PRPF4-203ENST00000488937 C1orf137Q5JT78 98 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 C12orf73Q69YU5 71 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 C2orf82Q6UX34 121 aa1.77□□□□□ -2.13
PRPF4-203ENST00000488937 C10orf105Q8TEF2 133 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms