RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 U3KQE9 123 aa9.66□□□□□ -0.86
CLIC4-202ENST00000488683 NF1P21359 2839 aa9.66□□□□□ -0.86
CLIC4-202ENST00000488683 IGHV7-4-1A0A0J9YVY3 117 aa9.66□□□□□ -0.86
CLIC4-202ENST00000488683 GPHB5Q86YW7 130 aa9.66□□□□□ -0.86
CLIC4-202ENST00000488683 AVPP01185 164 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 PRSS1P07477 247 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 S100A7P31151 101 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 LGALS9BQ3B8N2 356 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 LGALS9CQ6DKI2 356 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 GTSCR1Q86UQ5 136 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 MOB4Q9Y3A3 225 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 IGHV4-30-2A0A087WSY4 118 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 PF4V1P10720 104 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 HIST1H1AQ02539 215 aaPredicted RBP9.65□□□□□ -0.86
CLIC4-202ENST00000488683 FOXC2Q99958 501 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 MAP1LC3AQ9H492 121 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 PRORYQ9H606 182 aa9.65□□□□□ -0.86
CLIC4-202ENST00000488683 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
CLIC4-202ENST00000488683 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
CLIC4-202ENST00000488683 DEFB125Q8N687 156 aa9.64□□□□□ -0.87
CLIC4-202ENST00000488683 IGHV1-69DA0A0B4J2H0 117 aa9.64□□□□□ -0.87
CLIC4-202ENST00000488683 IGHV1-69P01742 117 aa9.64□□□□□ -0.87
CLIC4-202ENST00000488683 RBX1P62877 108 aa9.64□□□□□ -0.87
CLIC4-202ENST00000488683 DOPEY1Q5JWR5 2465 aa9.64□□□□□ -0.87
CLIC4-202ENST00000488683 SETD2Q9BYW2 2564 aaPredicted RBP9.64□□□□□ -0.87
CLIC4-202ENST00000488683 GNRH2O43555 120 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 ZNF462Q96JM2 2506 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 MUC4Q99102 2169 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 IGKV3-20P01619 116 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 C12orf54Q6X4T0 127 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
CLIC4-202ENST00000488683 JMJD8Q96S16 334 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 HIF1ANQ9NWT6 349 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 TMEM160Q9NX00 188 aa9.63□□□□□ -0.87
CLIC4-202ENST00000488683 RNASE4P34096 147 aaKnown RBP9.62□□□□□ -0.87
CLIC4-202ENST00000488683 PTPN13Q12923 2485 aa9.62□□□□□ -0.87
CLIC4-202ENST00000488683 C9orf47Q6ZRZ4 202 aa9.62□□□□□ -0.87
CLIC4-202ENST00000488683 OR2K2Q8NGT1 345 aa9.62□□□□□ -0.87
CLIC4-202ENST00000488683 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
CLIC4-202ENST00000488683 K7ERJ3 54 aa9.62□□□□□ -0.87
CLIC4-202ENST00000488683 JPT2Q9H910 190 aa9.62□□□□□ -0.87
CLIC4-202ENST00000488683 MYO9AB2RTY4 2548 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 IGLV2-18A0A075B6J9 118 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 LINC01546A6NGU7 62 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 PPBPP02775 128 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 CCL19Q99731 98 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 SONP18583 2426 aaKnown RBP9.61□□□□□ -0.87
CLIC4-202ENST00000488683 H3BUT2 72 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 CD5LO43866 347 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 ODF1Q14990 250 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 BOD1L2Q8IYS8 172 aa9.61□□□□□ -0.87
CLIC4-202ENST00000488683 MRPL53Q96EL3 112 aaKnown RBP9.61□□□□□ -0.87
CLIC4-202ENST00000488683 TMEM8BA6NDV4 472 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 FAM223BA6NKX1 122 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 MGPP08493 103 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 SMIM17P0DL12 118 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 CRIP2P52943 208 aaPredicted RBP9.6□□□□□ -0.87
CLIC4-202ENST00000488683 ATP5J2P56134 94 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 FAM223AQ8IWN6 122 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 NRACQ8N912 160 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 DPF1Q92782 380 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 FCER1GP30273 86 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 ANXA2RQ3ZCQ2 193 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 OR4X2Q8NGF9 303 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
CLIC4-202ENST00000488683 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
CLIC4-202ENST00000488683 ZC2HC1BQ5TFG8 222 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 MEGF9Q9H1U4 602 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 NXT2Q9NPJ8 142 aaKnown RBP9.59□□□□□ -0.87
CLIC4-202ENST00000488683 HHLA3Q9XRX5 114 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 A1L4Q6 167 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 SOCS3O14543 225 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 C10orf105Q8TEF2 133 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 PIMREGQ9BSJ6 248 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 NPFFR1Q9GZQ6 430 aa9.59□□□□□ -0.87
CLIC4-202ENST00000488683 EPG5Q9HCE0 2579 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 GCSHP23434 173 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 S100A4P26447 101 aaKnown RBP9.58□□□□□ -0.88
CLIC4-202ENST00000488683 ZFAND2AQ8N6M9 145 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 MAPKAPK5-AS1Q8N8E1 139 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 CHD6Q8TD26 2715 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 PRB1P04280 392 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 EMP1P54849 157 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 ADAMTSL5Q6ZMM2 481 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 C9orf139Q6ZV77 190 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 Q8N8P6 123 aa9.58□□□□□ -0.88
CLIC4-202ENST00000488683 FXYD2P54710 66 aa9.57□□□□□ -0.88
CLIC4-202ENST00000488683 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
CLIC4-202ENST00000488683 NDUFA4O00483 81 aa9.57□□□□□ -0.88
CLIC4-202ENST00000488683 RHPN1-AS1Q9BWJ2 59 aa9.57□□□□□ -0.88
CLIC4-202ENST00000488683 TRAV12-2A0A075B6T6 113 aa9.56□□□□□ -0.88
CLIC4-202ENST00000488683 A6NDX4 124 aa9.56□□□□□ -0.88
CLIC4-202ENST00000488683 SAP30O75446 220 aa9.56□□□□□ -0.88
CLIC4-202ENST00000488683 IGHG2P01859 326 aa9.56□□□□□ -0.88
CLIC4-202ENST00000488683 ZMAT4Q9H898 229 aa9.56□□□□□ -0.88
CLIC4-202ENST00000488683 WNK1Q9H4A3 2382 aa9.56□□□□□ -0.88
CLIC4-202ENST00000488683 IGHV4-4A0A075B6R2 117 aa9.56□□□□□ -0.88
CLIC4-202ENST00000488683 IGKCP01834 107 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms