RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 FMC1Q96HJ9 113 aa10.64□□□□□ -0.71
CXCL12-207ENST00000488591 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
CXCL12-207ENST00000488591 SPINK4O60575 86 aa10.63□□□□□ -0.71
CXCL12-207ENST00000488591 PFN1P07737 140 aaKnown RBP10.63□□□□□ -0.71
CXCL12-207ENST00000488591 AKR1C3P42330 323 aa10.63□□□□□ -0.71
CXCL12-207ENST00000488591 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
CXCL12-207ENST00000488591 TMEM88Q6PEY1 159 aa10.63□□□□□ -0.71
CXCL12-207ENST00000488591 SPXQ9BT56 116 aa10.63□□□□□ -0.71
CXCL12-207ENST00000488591 MANBALQ9NQG1 85 aa10.63□□□□□ -0.71
CXCL12-207ENST00000488591 ZFP30Q9Y2G7 519 aa10.63□□□□□ -0.71
CXCL12-207ENST00000488591 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
CXCL12-207ENST00000488591 P0DMU3 169 aa10.62□□□□□ -0.71
CXCL12-207ENST00000488591 FAM231AP0DMU4 169 aa10.62□□□□□ -0.71
CXCL12-207ENST00000488591 FAM231CP0DMU5 169 aa10.62□□□□□ -0.71
CXCL12-207ENST00000488591 ZNF80P51504 273 aaPredicted RBP10.62□□□□□ -0.71
CXCL12-207ENST00000488591 Q86TA4 180 aa10.62□□□□□ -0.71
CXCL12-207ENST00000488591 C15orf53Q8NAA6 179 aa10.62□□□□□ -0.71
CXCL12-207ENST00000488591 MDFICQ9P1T7 246 aa10.62□□□□□ -0.71
CXCL12-207ENST00000488591 GNG13Q9P2W3 67 aa10.62□□□□□ -0.71
CXCL12-207ENST00000488591 DYNC2H1Q8NCM8 4307 aaKnown RBP10.62□□□□□ -0.71
CXCL12-207ENST00000488591 TRBV6-1A0A0K0K1D8 114 aa10.61□□□□□ -0.71
CXCL12-207ENST00000488591 FABP5P3A8MUU1 101 aa10.61□□□□□ -0.71
CXCL12-207ENST00000488591 GNRH2O43555 120 aa10.61□□□□□ -0.71
CXCL12-207ENST00000488591 OR5I1Q13606 314 aa10.61□□□□□ -0.71
CXCL12-207ENST00000488591 C18orf15Q96N68 181 aa10.61□□□□□ -0.71
CXCL12-207ENST00000488591 TXNDC17Q9BRA2 123 aa10.61□□□□□ -0.71
CXCL12-207ENST00000488591 IFNA1P01562 189 aa10.6□□□□□ -0.71
CXCL12-207ENST00000488591 CCL20P78556 96 aa10.6□□□□□ -0.71
CXCL12-207ENST00000488591 MRPL16Q9NX20 251 aaKnown RBP10.6□□□□□ -0.71
CXCL12-207ENST00000488591 PLECQ15149 4684 aaKnown RBP10.6□□□□□ -0.71
CXCL12-207ENST00000488591 IGHV3-16A0A0C4DH30 117 aa10.59□□□□□ -0.71
CXCL12-207ENST00000488591 TYMSP04818 313 aa10.59□□□□□ -0.71
CXCL12-207ENST00000488591 NKX2-5P52952 324 aaPredicted RBP10.59□□□□□ -0.71
CXCL12-207ENST00000488591 RYR3Q15413 4870 aa10.59□□□□□ -0.71
CXCL12-207ENST00000488591 RYR2Q92736 4967 aa10.58□□□□□ -0.72
CXCL12-207ENST00000488591 SCO2A0A1W2PP80 73 aa10.58□□□□□ -0.72
CXCL12-207ENST00000488591 NUDT3O95989 172 aa10.58□□□□□ -0.72
CXCL12-207ENST00000488591 LTAP01374 205 aa10.58□□□□□ -0.72
CXCL12-207ENST00000488591 BLOC1S1P78537 153 aa10.58□□□□□ -0.72
CXCL12-207ENST00000488591 UBE2DNLQ8IWF7 75 aa10.58□□□□□ -0.72
CXCL12-207ENST00000488591 RASL10AQ92737 203 aa10.58□□□□□ -0.72
CXCL12-207ENST00000488591 M0R2P5 195 aa10.57□□□□□ -0.72
CXCL12-207ENST00000488591 FAM162BQ5T6X4 162 aa10.57□□□□□ -0.72
CXCL12-207ENST00000488591 ALKAL2Q6UX46 152 aa10.57□□□□□ -0.72
CXCL12-207ENST00000488591 COX8CQ7Z4L0 72 aa10.57□□□□□ -0.72
CXCL12-207ENST00000488591 ZC2HC1AQ96GY0 325 aa10.57□□□□□ -0.72
CXCL12-207ENST00000488591 C11orf21Q9P2W6 132 aa10.57□□□□□ -0.72
CXCL12-207ENST00000488591 ALMS1Q8TCU4 4167 aa10.57□□□□□ -0.72
CXCL12-207ENST00000488591 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
CXCL12-207ENST00000488591 ORM1P02763 201 aa10.56□□□□□ -0.72
CXCL12-207ENST00000488591 HOXA5P20719 270 aa10.56□□□□□ -0.72
CXCL12-207ENST00000488591 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
CXCL12-207ENST00000488591 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
CXCL12-207ENST00000488591 A0A0J9YY99 117 aa10.55□□□□□ -0.72
CXCL12-207ENST00000488591 H3BNG1 76 aa10.55□□□□□ -0.72
CXCL12-207ENST00000488591 PDE6DO43924 150 aa10.55□□□□□ -0.72
CXCL12-207ENST00000488591 IGHV3-53P01767 116 aa10.55□□□□□ -0.72
CXCL12-207ENST00000488591 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
CXCL12-207ENST00000488591 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
CXCL12-207ENST00000488591 SLAQ13239 276 aa10.55□□□□□ -0.72
CXCL12-207ENST00000488591 RNF212Q495C1 297 aa10.55□□□□□ -0.72
CXCL12-207ENST00000488591 BAGE2Q86Y30 109 aa10.55□□□□□ -0.72
CXCL12-207ENST00000488591 TRGV4A0A0C4DH28 118 aa10.54□□□□□ -0.72
CXCL12-207ENST00000488591 B4DEV8 164 aa10.54□□□□□ -0.72
CXCL12-207ENST00000488591 SH2D1AO60880 128 aa10.54□□□□□ -0.72
CXCL12-207ENST00000488591 BCL2P10415 239 aa10.54□□□□□ -0.72
CXCL12-207ENST00000488591 ASIPP42127 132 aa10.54□□□□□ -0.72
CXCL12-207ENST00000488591 C11orf52Q96A22 123 aa10.54□□□□□ -0.72
CXCL12-207ENST00000488591 VAX2Q9UIW0 290 aa10.54□□□□□ -0.72
CXCL12-207ENST00000488591 IGKV3D-20A0A0C4DH25 116 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 C9JCJ5 164 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 RPL35P42766 123 aaKnown RBP10.53□□□□□ -0.72
CXCL12-207ENST00000488591 CRIP1P50238 77 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 CCL18P55774 89 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 NHLRC2Q8NBF2 726 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 PRO0255Q9UI72 69 aa10.53□□□□□ -0.72
CXCL12-207ENST00000488591 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
CXCL12-207ENST00000488591 KRBOX1C9JBD0 128 aa10.52□□□□□ -0.73
CXCL12-207ENST00000488591 M0R036 132 aa10.52□□□□□ -0.73
CXCL12-207ENST00000488591 PAX4O43316 350 aa10.52□□□□□ -0.73
CXCL12-207ENST00000488591 PTH2Q96A98 100 aa10.52□□□□□ -0.73
CXCL12-207ENST00000488591 MED9Q9NWA0 146 aa10.52□□□□□ -0.73
CXCL12-207ENST00000488591 HHLA3Q9XRX5 114 aa10.52□□□□□ -0.73
CXCL12-207ENST00000488591 MUC4Q99102 2169 aa10.51□□□□□ -0.73
CXCL12-207ENST00000488591 SFTA3P0C7M3 94 aa10.51□□□□□ -0.73
CXCL12-207ENST00000488591 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
CXCL12-207ENST00000488591 FAM3BP58499 235 aaPredicted RBP10.51□□□□□ -0.73
CXCL12-207ENST00000488591 FHL2Q14192 279 aa10.51□□□□□ -0.73
CXCL12-207ENST00000488591 ZNF479Q96JC4 524 aa10.51□□□□□ -0.73
CXCL12-207ENST00000488591 MLST8Q9BVC4 326 aa10.51□□□□□ -0.73
CXCL12-207ENST00000488591 SACSQ9NZJ4 4579 aa10.5□□□□□ -0.73
CXCL12-207ENST00000488591 LCE2BO14633 110 aa10.5□□□□□ -0.73
CXCL12-207ENST00000488591 CIDEAO60543 219 aa10.5□□□□□ -0.73
CXCL12-207ENST00000488591 LINC01559Q495D7 138 aa10.5□□□□□ -0.73
CXCL12-207ENST00000488591 DNLZQ5SXM8 178 aa10.5□□□□□ -0.73
CXCL12-207ENST00000488591 VSIG2Q96IQ7 327 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms