RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 Q9UFV3 132 aa4.94□□□□□ -1.62
SIK3-212ENST00000488337 CEP295Q9C0D2 2601 aa4.94□□□□□ -1.62
SIK3-212ENST00000488337 hADV29S1A0JD25 119 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 CD59P13987 128 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 C1orf195Q5TG92 126 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 AMMECR1Q9Y4X0 333 aaPredicted RBP4.93□□□□□ -1.62
SIK3-212ENST00000488337 ARFGEF3Q5TH69 2177 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 ZNF462Q96JM2 2506 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 PINLYPA6NC86 204 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 DPM2O94777 84 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 TRACP01848 142 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 PRSS1P07477 247 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 LINC00205P59089 165 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 SRSF9Q13242 221 aaKnown RBP eCLIP4.93□□□□□ -1.62
SIK3-212ENST00000488337 VKORC1L1Q8N0U8 176 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 SPTBN5Q9NRC6 3674 aaKnown RBP4.93□□□□□ -1.62
SIK3-212ENST00000488337 ZNF503-AS2A6NEH8 195 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 WNT9BO14905 357 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 PLAUP00749 431 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 DUTP33316 252 aaKnown RBP4.93□□□□□ -1.62
SIK3-212ENST00000488337 UBE2L3P68036 154 aaKnown RBP4.93□□□□□ -1.62
SIK3-212ENST00000488337 PLGLAQ15195 96 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 PSMG3-AS1Q96PY0 264 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 REV3LO60673 3130 aa4.93□□□□□ -1.62
SIK3-212ENST00000488337 LOC107984156A0A0G2JMH3 177 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 CFC1BP0CG36 223 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 CFC1P0CG37 223 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 HOXB4P17483 251 aaPredicted RBP4.92□□□□□ -1.62
SIK3-212ENST00000488337 TCF15Q12870 199 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 OXLD1Q5BKU9 147 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 ARL17AQ8IVW1 177 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 HES7Q9BYE0 225 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 UPK2O00526 184 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 LYZL6O75951 148 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 SUB1P53999 127 aaKnown RBP eCLIP4.92□□□□□ -1.62
SIK3-212ENST00000488337 ZNF56Q15929 161 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 TMEM155Q4W5P6 130 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 FAM53AQ6NSI3 398 aaPredicted RBP4.92□□□□□ -1.62
SIK3-212ENST00000488337 ERHP84090 104 aaKnown RBP4.92□□□□□ -1.62
SIK3-212ENST00000488337 C1orf158Q8N1D5 194 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 LINC01561Q8N1V8 128 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 IL17DQ8TAD2 202 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 VKORC1Q9BQB6 163 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 TTTY12Q9BZ98 90 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 CFAP54Q96N23 3096 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 TRBV10-2A0A0K0K1G8 114 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 LINC00473A8K010 186 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 P01737 135 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 FOXF2Q12947 444 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 Q8N8P6 123 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 AAMDCQ9H7C9 122 aa4.92□□□□□ -1.62
SIK3-212ENST00000488337 IGKV1OR2-108A0A075B7D4 117 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 TRAV13-1A0A0B4J241 112 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 H3BVH4 76 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 ZNF22P17026 224 aaPredicted RBP4.91□□□□□ -1.62
SIK3-212ENST00000488337 NABP2Q9BQ15 211 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 LY6G6EA0A0G2JKS1 128 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 H3BMM0 161 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 ZNF134P52741 427 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 Q0VFX4 171 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 MORN5Q5VZ52 161 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 KLF14Q8TD94 323 aaPredicted RBP4.91□□□□□ -1.62
SIK3-212ENST00000488337 UBE2WQ96B02 151 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 CXXC4Q9H2H0 198 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 U3KQA8 63 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 HIVEP2P31629 2446 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 HIVEP3Q5T1R4 2406 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 MED13Q9UHV7 2174 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 A0A1B0GUT8 65 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 NDUFC2-KCTD14E9PQ53 114 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 ARMS2P0C7Q2 107 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 FXYD7P58549 80 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 TWIST1Q15672 202 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 Q1RN00 199 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 TMEM190Q8WZ59 177 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 DCTN5Q9BTE1 182 aa4.91□□□□□ -1.62
SIK3-212ENST00000488337 D6R8Y8 96 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 ENSAO43768 121 aaKnown RBP4.9□□□□□ -1.62
SIK3-212ENST00000488337 WT1P19544 449 aaPredicted RBP4.9□□□□□ -1.62
SIK3-212ENST00000488337 LINC01620Q4KN68 170 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 IGFL2Q6UWQ7 119 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 FP248Q71RG6 208 aaPredicted RBP4.9□□□□□ -1.62
SIK3-212ENST00000488337 SORL1Q92673 2214 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 FASNP49327 2511 aaKnown RBP4.9□□□□□ -1.62
SIK3-212ENST00000488337 SPTBN4Q9H254 2564 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 C17orf100A8MU93 164 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 TFF1P04155 84 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 PRDX2P32119 198 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 IL17RELQ6ZVW7 336 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 WDR86Q86TI4 376 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 METTL26Q96S19 204 aa4.9□□□□□ -1.62
SIK3-212ENST00000488337 ZGRF1Q86YA3 2104 aa4.9□□□□□ -1.63
SIK3-212ENST00000488337 TLN1Q9Y490 2541 aaKnown RBP4.9□□□□□ -1.63
SIK3-212ENST00000488337 TRBV6-1A0A0K0K1D8 114 aa4.9□□□□□ -1.63
SIK3-212ENST00000488337 FAM104BQ5XKR9 115 aa4.9□□□□□ -1.63
SIK3-212ENST00000488337 LINC00482Q8N8I6 264 aa4.9□□□□□ -1.63
SIK3-212ENST00000488337 FXYD5Q96DB9 178 aa4.9□□□□□ -1.63
SIK3-212ENST00000488337 C20orf173Q96LM9 149 aa4.9□□□□□ -1.63
SIK3-212ENST00000488337 IGLV2-18A0A075B6J9 118 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms