RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 A0A087WWC5 75 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 GAGE12JA6NER3 117 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 FAUP35544 74 aaKnown RBP5.94□□□□□ -1.46
COL17A1-207ENST00000488320 GAGE1Q13065 139 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 GAGE4Q13068 117 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 GAGE5Q13069 117 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 ELOBQ15370 118 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 GAGE13Q4V321 117 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 CFAP126Q5VTH2 177 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 Q6AWC8 147 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 MCFD2Q8NI22 146 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 DYNC2LI1Q8TCX1 351 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 C20orf85Q9H1P6 137 aa5.94□□□□□ -1.46
COL17A1-207ENST00000488320 RABL2AQ9UBK7 228 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-207ENST00000488320 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-207ENST00000488320 A0A087WX48 190 aa5.93□□□□□ -1.46
COL17A1-207ENST00000488320 NBEAP1P0C6P0 100 aa5.93□□□□□ -1.46
COL17A1-207ENST00000488320 MGST1P10620 155 aaKnown RBP5.93□□□□□ -1.46
COL17A1-207ENST00000488320 TAS2R30P59541 319 aa5.93□□□□□ -1.46
COL17A1-207ENST00000488320 DGAT2L7PQ6IED9 249 aa5.93□□□□□ -1.46
COL17A1-207ENST00000488320 C1orf43Q9BWL3 253 aa5.93□□□□□ -1.46
COL17A1-207ENST00000488320 SDF2L1Q9HCN8 221 aa5.93□□□□□ -1.46
COL17A1-207ENST00000488320 PGPA6NDG6 321 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 DIRC3C9JPN6 131 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 PANO1I0J062 215 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 L7N2F9 121 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 TYMSP04818 313 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 RPL29P47914 159 aaKnown RBP5.92□□□□□ -1.46
COL17A1-207ENST00000488320 INPP1P49441 399 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 BCAP31P51572 246 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 VAMP2P63027 116 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 BAXQ07812 192 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 Q0VG73 95 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 XP32Q5T750 250 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 DPPA3Q6W0C5 159 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 NIT1Q86X76 327 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 CYB561D1Q8N8Q1 229 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 C9orf163Q8N9P6 203 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 SLC25A21Q9BQT8 299 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-207ENST00000488320 GSKIPQ9P0R6 139 aa5.92□□□□□ -1.46
COL17A1-207ENST00000488320 RSL24D1Q9UHA3 163 aaKnown RBP5.92□□□□□ -1.46
COL17A1-207ENST00000488320 TRAV21A0A0B4J279 112 aa5.91□□□□□ -1.46
COL17A1-207ENST00000488320 RBAKDNA6NC62 111 aa5.91□□□□□ -1.46
COL17A1-207ENST00000488320 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
COL17A1-207ENST00000488320 CAV2P51636 162 aa5.91□□□□□ -1.46
COL17A1-207ENST00000488320 IAH1Q2TAA2 248 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-207ENST00000488320 ASB13Q8WXK3 278 aa5.91□□□□□ -1.46
COL17A1-207ENST00000488320 KCNS1Q96KK3 526 aa5.91□□□□□ -1.46
COL17A1-207ENST00000488320 NAA50Q9GZZ1 169 aaKnown RBP5.91□□□□□ -1.46
COL17A1-207ENST00000488320 UQCC1Q9NVA1 299 aa5.91□□□□□ -1.46
COL17A1-207ENST00000488320 LENEPQ9Y5L5 61 aa5.91□□□□□ -1.46
COL17A1-207ENST00000488320 A0A0J9YXV3 536 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 C7orf66A4D0T2 115 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 TMEM262E9PQX1 116 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 HLA-DQA1P01909 254 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 AP3S2P59780 193 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 RANP62826 216 aaKnown RBP5.9□□□□□ -1.46
COL17A1-207ENST00000488320 OR2T35Q8NGX2 323 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 C7orf33Q8WU49 177 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 SLC25A2Q9BXI2 301 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 WDR83OSQ9Y284 106 aa5.9□□□□□ -1.46
COL17A1-207ENST00000488320 A0A0U1RQV1 116 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 UBE2L5PA0A1B0GUS4 154 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 C9orf170A2RU37 121 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 PHOX2AO14813 284 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 CST7O76096 145 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 CRPP02741 224 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 PRSS1P07477 247 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 FGF8P55075 233 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-207ENST00000488320 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 RPL19P84098 196 aaKnown RBP5.89□□□□□ -1.47
COL17A1-207ENST00000488320 CTF1Q16619 201 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 ATRAIDQ6UW56 229 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 SDIM1Q6ZPB5 146 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 TOMM5Q8N4H5 51 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 SAMD10Q9BYL1 202 aa5.89□□□□□ -1.47
COL17A1-207ENST00000488320 A0A087WYN8 130 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 PGPEP1LA6NFU8 196 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 ATP6V1G2O95670 118 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 FGF7P21781 194 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 GCSAMLQ5JQS6 135 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 ZNF506Q5JVG8 444 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 WDR73Q6P4I2 378 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 MIR17HGQ75NE6 70 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 PHYHIPLQ96FC7 376 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 HYLS1Q96M11 299 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 CHCHD7Q9BUK0 85 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 NMES1Q9C002 83 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 LSM5Q9Y4Y9 91 aaKnown RBP5.88□□□□□ -1.47
COL17A1-207ENST00000488320 KIF25-AS1Q9Y6Z4 181 aa5.88□□□□□ -1.47
COL17A1-207ENST00000488320 FAM24AA6NFZ4 105 aa5.87□□□□□ -1.47
COL17A1-207ENST00000488320 F6UZH7 168 aa5.87□□□□□ -1.47
COL17A1-207ENST00000488320 MBPP02686 304 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-207ENST00000488320 LGALSLQ3ZCW2 172 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-207ENST00000488320 GTSF1Q8WW33 167 aa5.87□□□□□ -1.47
COL17A1-207ENST00000488320 TMED6Q8WW62 240 aa5.87□□□□□ -1.47
COL17A1-207ENST00000488320 RNF185Q96GF1 192 aa5.87□□□□□ -1.47
COL17A1-207ENST00000488320 FAM167A-AS1Q96KT0 104 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms