RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 UBE2CO00762 179 aa7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 CA1P00915 261 aaPredicted RBP7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 ORM1P02763 201 aa7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 CRIP1P50238 77 aa7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 ZNF80P51504 273 aaPredicted RBP7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 FXYD7P58549 80 aa7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 PRR9Q5T870 116 aa7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 FAM159AQ6UWV7 190 aa7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 XCL2Q9UBD3 114 aa7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 GOLT1BQ9Y3E0 138 aa7.75□□□□□ -1.17
HLA-DMB-261ENST00000487996 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 TMEM189A5PLL7 270 aa7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 A8MWL6 223 aa7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 CRXO43186 299 aaPredicted RBP7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 ZNF324O75467 553 aaPredicted RBP7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 ANKRD39Q53RE8 183 aa7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 LINC00322Q6ZN03 302 aaPredicted RBP7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 OR2D3Q8NGH3 330 aa7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 PYGO2Q9BRQ0 406 aa7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 TMEM208Q9BTX3 173 aa7.74□□□□□ -1.17
HLA-DMB-261ENST00000487996 FAM231BA6NCW3 169 aa7.73□□□□□ -1.17
HLA-DMB-261ENST00000487996 CXCL1P09341 107 aa7.73□□□□□ -1.17
HLA-DMB-261ENST00000487996 TDRG1Q3Y452 100 aa7.73□□□□□ -1.17
HLA-DMB-261ENST00000487996 NAGKQ9UJ70 344 aa7.73□□□□□ -1.17
HLA-DMB-261ENST00000487996 V9GYV3 84 aa7.73□□□□□ -1.17
HLA-DMB-261ENST00000487996 CXorf65A6NEN9 183 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 S100PP25815 95 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 S100A12P80511 92 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 KIR3DS1Q14943 382 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 KCNIP4Q6PIL6 250 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 TSKUQ8WUA8 353 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 IMMP2LQ96T52 175 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 LINC00467Q9BRT7 94 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 GFRA4Q9GZZ7 299 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 TRGV11A0A075B6L2 103 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 IGHV1OR15-1A0A075B7D0 117 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 RPL19P84098 196 aaKnown RBP7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 LINC01587Q99440 93 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 IL36BQ9NZH7 164 aa7.72□□□□□ -1.17
HLA-DMB-261ENST00000487996 A0A1W2PPQ1 181 aa7.71□□□□□ -1.18
HLA-DMB-261ENST00000487996 GIG44P09565 113 aaPredicted RBP7.71□□□□□ -1.18
HLA-DMB-261ENST00000487996 ANXA2RQ3ZCQ2 193 aa7.71□□□□□ -1.18
HLA-DMB-261ENST00000487996 MUC21Q5SSG8 566 aa7.71□□□□□ -1.18
HLA-DMB-261ENST00000487996 Q6ZWC4 215 aa7.71□□□□□ -1.18
HLA-DMB-261ENST00000487996 BTF3L4Q96K17 158 aa7.71□□□□□ -1.18
HLA-DMB-261ENST00000487996 SMCO4Q9NRQ5 59 aa7.71□□□□□ -1.18
HLA-DMB-261ENST00000487996 IGKV3D-20A0A0C4DH25 116 aa7.7□□□□□ -1.18
HLA-DMB-261ENST00000487996 CBY3A6NI87 242 aa7.7□□□□□ -1.18
HLA-DMB-261ENST00000487996 S100A4P26447 101 aaKnown RBP7.7□□□□□ -1.18
HLA-DMB-261ENST00000487996 ASIPP42127 132 aa7.7□□□□□ -1.18
HLA-DMB-261ENST00000487996 NAT8BQ9UHF3 227 aa7.7□□□□□ -1.18
HLA-DMB-261ENST00000487996 TRAV9-1A0A075B6T8 112 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 TMSB15BA0A087X1C1 80 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 SMIM27A0A1W2PRY6 76 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 FRMD6-AS1P0C7T7 363 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 MED14OSP0DP75 135 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 SSTP61278 116 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 DNLZQ5SXM8 178 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 ATRAIDQ6UW56 229 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 ZNF705AQ6ZN79 300 aaPredicted RBP7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 C1orf158Q8N1D5 194 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 CSNK1G2-AS1Q8NCQ2 148 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 C11orf21Q9P2W6 132 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 IGHV3OR16-12A0A075B7B8 117 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 SMIM9A6NGZ8 99 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 HIGD1CA8MV81 97 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 F2Z2F3 143 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 RBMY1A1P0DJD3 496 aaKnown RBP7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 RBMY1CP0DJD4 496 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 FOXA3P55318 350 aaPredicted RBP7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 RBMY1FQ15415 496 aaKnown RBP7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 FER1L6-AS1Q8NA97 138 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 NEU1Q99519 415 aa7.69□□□□□ -1.18
HLA-DMB-261ENST00000487996 K7EIL1 84 aa7.68□□□□□ -1.18
HLA-DMB-261ENST00000487996 TYMSP04818 313 aa7.68□□□□□ -1.18
HLA-DMB-261ENST00000487996 HTN1P15515 57 aa7.68□□□□□ -1.18
HLA-DMB-261ENST00000487996 ZNF415Q09FC8 603 aa7.68□□□□□ -1.18
HLA-DMB-261ENST00000487996 RRN3P1Q2M238 152 aa7.68□□□□□ -1.18
HLA-DMB-261ENST00000487996 Q6ZQT7 251 aa7.68□□□□□ -1.18
HLA-DMB-261ENST00000487996 ZNF493Q6ZR52 646 aa7.68□□□□□ -1.18
HLA-DMB-261ENST00000487996 TP53TG1Q9Y2A0 90 aa7.68□□□□□ -1.18
HLA-DMB-261ENST00000487996 GRIFINA4D1Z8 144 aa7.67□□□□□ -1.18
HLA-DMB-261ENST00000487996 OR5AL1P0C617 328 aa7.67□□□□□ -1.18
HLA-DMB-261ENST00000487996 DEFB135Q30KP9 77 aa7.67□□□□□ -1.18
HLA-DMB-261ENST00000487996 DEFB121Q5J5C9 76 aa7.67□□□□□ -1.18
HLA-DMB-261ENST00000487996 TMEM263Q8WUH6 116 aaKnown RBP7.67□□□□□ -1.18
HLA-DMB-261ENST00000487996 C16orf74Q96GX8 76 aa7.67□□□□□ -1.18
HLA-DMB-261ENST00000487996 TPPP3Q9BW30 176 aa7.67□□□□□ -1.18
HLA-DMB-261ENST00000487996 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
HLA-DMB-261ENST00000487996 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 IGLC6P0CF74 106 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 GZMBP10144 247 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 CTRLP40313 264 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 TCL1AP56279 114 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 TMEM88Q6PEY1 159 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 ATP5L2Q7Z4Y8 100 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 GTSF1Q8WW33 167 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 RNF183Q96D59 192 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms