RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 BCL2P10415 239 aa2□□□□□ -2.09
UBR3-211ENST00000487689 S100A4P26447 101 aaKnown RBP2□□□□□ -2.09
UBR3-211ENST00000487689 LPAR6P43657 344 aa2□□□□□ -2.09
UBR3-211ENST00000487689 POLR2HP52434 150 aaKnown RBP2□□□□□ -2.09
UBR3-211ENST00000487689 DEFA3P59666 94 aa2□□□□□ -2.09
UBR3-211ENST00000487689 YPEL3P61236 119 aaPredicted RBP2□□□□□ -2.09
UBR3-211ENST00000487689 ZNF616Q08AN1 781 aa2□□□□□ -2.09
UBR3-211ENST00000487689 FUT5Q11128 374 aa2□□□□□ -2.09
UBR3-211ENST00000487689 OR8B8Q15620 311 aa2□□□□□ -2.09
UBR3-211ENST00000487689 NDUFA5Q16718 116 aa2□□□□□ -2.09
UBR3-211ENST00000487689 AADACL3Q5VUY0 350 aa2□□□□□ -2.09
UBR3-211ENST00000487689 RPL13AP3Q6NVV1 102 aa2□□□□□ -2.09
UBR3-211ENST00000487689 ZNF322Q6U7Q0 402 aaPredicted RBP2□□□□□ -2.09
UBR3-211ENST00000487689 ZNF720Q7Z2F6 126 aa2□□□□□ -2.09
UBR3-211ENST00000487689 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
UBR3-211ENST00000487689 TEX29Q8N6K0 151 aa2□□□□□ -2.09
UBR3-211ENST00000487689 RPS4Y2Q8TD47 263 aa2□□□□□ -2.09
UBR3-211ENST00000487689 DNAJC9Q8WXX5 260 aa2□□□□□ -2.09
UBR3-211ENST00000487689 UPK3BQ9BT76 320 aa2□□□□□ -2.09
UBR3-211ENST00000487689 DERL1Q9BUN8 251 aa2□□□□□ -2.09
UBR3-211ENST00000487689 SMDT1Q9H4I9 107 aa2□□□□□ -2.09
UBR3-211ENST00000487689 CBLN4Q9NTU7 201 aa2□□□□□ -2.09
UBR3-211ENST00000487689 CKLFQ9UBR5 152 aa2□□□□□ -2.09
UBR3-211ENST00000487689 NINQ8N4C6 2090 aa2□□□□□ -2.09
UBR3-211ENST00000487689 TRAV41A0A0B4J266 112 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 IRGMA1A4Y4 181 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 FABP5P3A8MUU1 101 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 TRAPPC2LH3BP13 241 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 K7EP13 123 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 CYB5BO43169 146 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 TPST1O60507 370 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 IGKV1-5P01602 117 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 IGHV1-69P01742 117 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 IGHV3-53P01767 116 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 MPC1LP0DKB6 136 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 CCL3P10147 92 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 CRHBPP24387 322 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 NPY1RP25929 384 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 ZNF80P51504 273 aaPredicted RBP1.99□□□□□ -2.09
UBR3-211ENST00000487689 TAS2R30P59541 319 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 PLGLB1Q02325 96 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 RPL18Q07020 188 aaKnown RBP1.99□□□□□ -2.09
UBR3-211ENST00000487689 PLCXD2Q0VAA5 305 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 RTL8BQ17RB0 113 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 SPANXN3Q5MJ09 141 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 SPATA12Q7Z6I5 190 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 TRAPPC6BQ86SZ2 158 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 SBSPONQ8IVN8 264 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 ST20-AS1Q8NBB2 130 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 TMEM229BQ8NBD8 167 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 OR4E2Q8NGC2 313 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 KLF14Q8TD94 323 aaPredicted RBP1.99□□□□□ -2.09
UBR3-211ENST00000487689 CANT1Q8WVQ1 401 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 TEX37Q96LM6 180 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 AICDAQ9GZX7 198 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 SLC39A9Q9NUM3 307 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 FAIMQ9NVQ4 179 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 OR5V1Q9UGF6 321 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 HSPB8Q9UJY1 196 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 PCTPQ9UKL6 214 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 MCTS1Q9ULC4 181 aaKnown RBP1.99□□□□□ -2.09
UBR3-211ENST00000487689 MED31Q9Y3C7 131 aa1.99□□□□□ -2.09
UBR3-211ENST00000487689 A0A0B4J2C4 111 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 A8MUU9 505 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 MIF4GDA9UHW6 222 aaKnown RBP1.98□□□□□ -2.09
UBR3-211ENST00000487689 E7EQL1 145 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 TAX1BP3O14907 124 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 LEPROTO15243 131 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 ZNF73O43830 326 aaPredicted RBP1.98□□□□□ -2.09
UBR3-211ENST00000487689 GGCTO75223 188 aaKnown RBP1.98□□□□□ -2.09
UBR3-211ENST00000487689 NPYP01303 97 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 APOC1P02654 83 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 IGKV4-1P06312 121 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 SCTP09683 121 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 RPL7P18124 248 aaKnown RBP1.98□□□□□ -2.09
UBR3-211ENST00000487689 RPS3P23396 243 aaKnown RBP eCLIP1.98□□□□□ -2.09
UBR3-211ENST00000487689 NFYBP25208 207 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 EIF5AP63241 154 aaKnown RBP1.98□□□□□ -2.09
UBR3-211ENST00000487689 MORN2Q502X0 79 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 BCL2L15Q5TBC7 163 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 SDIM1Q6ZPB5 146 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 ADM2Q7Z4H4 148 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 CNEP1R1Q8N9A8 125 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 OR5C1Q8NGR4 320 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 CLDND2Q8NHS1 167 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 SLAMF6Q96DU3 332 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 YPEL2Q96QA6 119 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 GPX7Q96SL4 187 aaPredicted RBP1.98□□□□□ -2.09
UBR3-211ENST00000487689 YIPF3Q9GZM5 350 aa1.98□□□□□ -2.09
UBR3-211ENST00000487689 SOX21Q9Y651 276 aaPredicted RBP1.98□□□□□ -2.09
UBR3-211ENST00000487689 MED12LQ86YW9 2145 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 USH2AO75445 5202 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 IGKV1OR2-108A0A075B7D4 117 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 IGHV3-73A0A0B4J1V6 119 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 IGKV1D-43A0A0B4J1Z2 117 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 TRDV1A0A1B0GX56 115 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 ARRDC5A6NEK1 342 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 C5orf58C9J3I9 102 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 H3BQ85 93 aa1.97□□□□□ -2.09
UBR3-211ENST00000487689 OVOL1O14753 267 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms