RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 IGHV1-69DA0A0B4J2H0 117 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 TCL1BO95988 128 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 NDUFA11Q86Y39 141 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 SPXQ9BT56 116 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 IGLV2-11P01706 119 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 CRIP1P50238 77 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 Q6ZS92 163 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 CACNA1BQ00975 2339 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 DYSFO75923 2080 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 A4D1N5 150 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 SNRPD3P62318 126 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 CFAP126Q5VTH2 177 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 ZFP2Q6ZN57 461 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 CARD19Q96LW7 228 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 DNAH12Q6ZR08 3092 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 NCKAP5O14513 1909 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 TRBV7-9A0A0J9YWB2 115 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 OOSP1A8MZH6 123 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 IGLC6P0CF74 106 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 FOXC1Q12948 553 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 XGP55808 180 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 GATD1Q8NB37 220 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 IGHG4P01861 327 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 NDPQ00604 133 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 SRSF2Q01130 221 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 ZNF876PQ49A33 203 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
HLA-DQB1-209ENST00000487676 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
HLA-DQB1-209ENST00000487676 MED13LQ71F56 2210 aa11.91□□□□□ -0.5
HLA-DQB1-209ENST00000487676 A0A087WWL8 130 aa11.91□□□□□ -0.5
HLA-DQB1-209ENST00000487676 TEX22C9J3V5 150 aa11.91□□□□□ -0.5
HLA-DQB1-209ENST00000487676 MORN3Q6PF18 240 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-209ENST00000487676 TOMM6Q96B49 74 aa11.91□□□□□ -0.5
HLA-DQB1-209ENST00000487676 WI2-2373I1.2A0A1W2PRP0 233 aa11.9□□□□□ -0.5
HLA-DQB1-209ENST00000487676 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-209ENST00000487676 PCNTO95613 3336 aa11.9□□□□□ -0.5
HLA-DQB1-209ENST00000487676 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
HLA-DQB1-209ENST00000487676 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
HLA-DQB1-209ENST00000487676 KAAG1Q9UBP8 84 aa11.9□□□□□ -0.5
HLA-DQB1-209ENST00000487676 TRBV7-1A0A0A6YYK4 115 aa11.9□□□□□ -0.51
HLA-DQB1-209ENST00000487676 GAGE2AQ6NT46 116 aa11.9□□□□□ -0.51
HLA-DQB1-209ENST00000487676 SPANXCQ9NY87 97 aa11.9□□□□□ -0.51
HLA-DQB1-209ENST00000487676 ABCA4P78363 2273 aa11.89□□□□□ -0.51
HLA-DQB1-209ENST00000487676 VMO1Q7Z5L0 202 aa11.89□□□□□ -0.51
HLA-DQB1-209ENST00000487676 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
HLA-DQB1-209ENST00000487676 LRP4O75096 1905 aa11.89□□□□□ -0.51
HLA-DQB1-209ENST00000487676 A0A0U1RRA0 63 aa11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 ZNF80P51504 273 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 FOXE3Q13461 319 aa11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 MSMPQ1L6U9 139 aa11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 MINOS1Q5TGZ0 78 aa11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 MINOS1-NBL1R4GNA1 71 aa11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 COL5A1P20908 1838 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB1-209ENST00000487676 A0A096LNJ9 63 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 TRBV10-2A0A0K0K1G8 114 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 LINC01619G3V211 115 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 DUSP14O95147 198 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 ACYP1P07311 99 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 KHDC1LQ5JSQ8 128 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 CTSZQ9UBR2 303 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 ZNF672Q499Z4 452 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 LINC01560Q8TB33 94 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 LENEPQ9Y5L5 61 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 PTPRSQ13332 1948 aa11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-209ENST00000487676 WT1P19544 449 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 Q8N1Y9 231 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 FAM110DQ8TAY7 271 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 NDUFA12Q9UI09 145 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 C11orf86A6NJI1 115 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 M0R1W7 72 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 TRPT1Q86TN4 253 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 RNF185Q96GF1 192 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 CEP350Q5VT06 3117 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 LEPROTO15243 131 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
HLA-DQB1-209ENST00000487676 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
HLA-DQB1-209ENST00000487676 TANC2Q9HCD6 1990 aa11.84□□□□□ -0.51
HLA-DQB1-209ENST00000487676 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
HLA-DQB1-209ENST00000487676 PRAC2D3DTV9 90 aa11.84□□□□□ -0.51
HLA-DQB1-209ENST00000487676 H3BT86 120 aa11.84□□□□□ -0.51
HLA-DQB1-209ENST00000487676 BDP1A6H8Y1 2624 aa11.84□□□□□ -0.51
HLA-DQB1-209ENST00000487676 FAM236AA0A1B0GUQ0 79 aa11.84□□□□□ -0.51
HLA-DQB1-209ENST00000487676 FAM236BA0A1B0GV22 79 aa11.84□□□□□ -0.51
HLA-DQB1-209ENST00000487676 PRSS33Q8NF86 280 aa11.83□□□□□ -0.51
HLA-DQB1-209ENST00000487676 UBE2L6O14933 153 aa11.83□□□□□ -0.52
HLA-DQB1-209ENST00000487676 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
HLA-DQB1-209ENST00000487676 WDR87Q6ZQQ6 2873 aa11.83□□□□□ -0.52
HLA-DQB1-209ENST00000487676 TRAV41A0A0B4J266 112 aa11.82□□□□□ -0.52
HLA-DQB1-209ENST00000487676 NEXN-AS1Q8NBZ9 246 aa11.82□□□□□ -0.52
HLA-DQB1-209ENST00000487676 ZMAT4Q9H898 229 aa11.82□□□□□ -0.52
HLA-DQB1-209ENST00000487676 TRACP01848 142 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms