RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 C19orf71A6NCJ1 209 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 F8W036 122 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 H7BYZ3 331 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 AZU1P20160 251 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 ANXA2RQ3ZCQ2 193 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 ZNF575Q86XF7 245 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 OR11H2Q8NH07 326 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 TMEM208Q9BTX3 173 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 NAGKQ9UJ70 344 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 TP53TG3Q9ULZ0 132 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 HYDINQ4G0P3 5121 aa9.23□□□□□ -0.93
HDAC6-229ENST00000486665 IGHV1OR15-1A0A075B7D0 117 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 IGKV3D-20A0A0C4DH25 116 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 GNRH2O43555 120 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 HTN1P15515 57 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 NDUFA5Q16718 116 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 C10orf91Q5T1B1 145 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 TMEM256Q8N2U0 113 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 NUDT10Q8NFP7 164 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 NUDT11Q96G61 164 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 RNASE7Q9H1E1 156 aaKnown RBP9.22□□□□□ -0.93
HDAC6-229ENST00000486665 TP53TG1Q9Y2A0 90 aa9.22□□□□□ -0.93
HDAC6-229ENST00000486665 KRBOX1C9JBD0 128 aa9.21□□□□□ -0.94
HDAC6-229ENST00000486665 ORM1P02763 201 aa9.21□□□□□ -0.94
HDAC6-229ENST00000486665 RPL19P84098 196 aaKnown RBP9.21□□□□□ -0.94
HDAC6-229ENST00000486665 ADIRFQ15847 76 aa9.21□□□□□ -0.94
HDAC6-229ENST00000486665 SPATA25Q9BR10 227 aa9.21□□□□□ -0.94
HDAC6-229ENST00000486665 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
HDAC6-229ENST00000486665 LINC00467Q9BRT7 94 aa9.21□□□□□ -0.94
HDAC6-229ENST00000486665 SEC11CQ9BY50 192 aa9.21□□□□□ -0.94
HDAC6-229ENST00000486665 TMSB15BA0A087X1C1 80 aa9.2□□□□□ -0.94
HDAC6-229ENST00000486665 M0R036 132 aa9.2□□□□□ -0.94
HDAC6-229ENST00000486665 TDRG1Q3Y452 100 aa9.2□□□□□ -0.94
HDAC6-229ENST00000486665 FAM159AQ6UWV7 190 aa9.2□□□□□ -0.94
HDAC6-229ENST00000486665 ISOC2Q96AB3 205 aa9.2□□□□□ -0.94
HDAC6-229ENST00000486665 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
HDAC6-229ENST00000486665 NEU1Q99519 415 aa9.2□□□□□ -0.94
HDAC6-229ENST00000486665 BIN3Q9NQY0 253 aa9.2□□□□□ -0.94
HDAC6-229ENST00000486665 GRIFINA4D1Z8 144 aa9.19□□□□□ -0.94
HDAC6-229ENST00000486665 CBY3A6NI87 242 aa9.19□□□□□ -0.94
HDAC6-229ENST00000486665 B4DEV8 164 aa9.19□□□□□ -0.94
HDAC6-229ENST00000486665 TYMSP04818 313 aa9.19□□□□□ -0.94
HDAC6-229ENST00000486665 RRN3P1Q2M238 152 aa9.19□□□□□ -0.94
HDAC6-229ENST00000486665 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
HDAC6-229ENST00000486665 MDFICQ9P1T7 246 aa9.19□□□□□ -0.94
HDAC6-229ENST00000486665 IGHV4-28A0A0C4DH34 117 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 TMEM189A5PLL7 270 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 SMIM9A6NGZ8 99 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 DEFB4AO15263 64 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 P01737 135 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 ERVFC1-1P60608 527 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 IBA57Q5T440 356 aaKnown RBP9.18□□□□□ -0.94
HDAC6-229ENST00000486665 FAM231DQ6ZW35 169 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 Q8NAQ8 132 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 OR2D3Q8NGH3 330 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 ZMAT4Q9H898 229 aa9.18□□□□□ -0.94
HDAC6-229ENST00000486665 CARHSP1Q9Y2V2 147 aaKnown RBP9.18□□□□□ -0.94
HDAC6-229ENST00000486665 IGHV3-16A0A0C4DH30 117 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 LCE6AA0A183 80 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 PLAC8L1A1L4L8 177 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 GATCO43716 136 aaKnown RBP9.17□□□□□ -0.94
HDAC6-229ENST00000486665 GZMBP10144 247 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 MIFP14174 115 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 ZFAND6Q6FIF0 208 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 RNASE8Q8TDE3 154 aaKnown RBP9.17□□□□□ -0.94
HDAC6-229ENST00000486665 SFRP2Q96HF1 295 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 KCNS1Q96KK3 526 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 GSN-AS1Q9NRJ2 163 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 OSTCQ9NRP0 149 aa9.17□□□□□ -0.94
HDAC6-229ENST00000486665 EMP1P54849 157 aa9.16□□□□□ -0.94
HDAC6-229ENST00000486665 PNRC1Q12796 327 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-229ENST00000486665 OR10G8Q8NGN5 311 aa9.16□□□□□ -0.94
HDAC6-229ENST00000486665 RPP21Q9H633 154 aaKnown RBP9.16□□□□□ -0.94
HDAC6-229ENST00000486665 V9GYV3 84 aa9.16□□□□□ -0.94
HDAC6-229ENST00000486665 PLECQ15149 4684 aaKnown RBP9.16□□□□□ -0.94
HDAC6-229ENST00000486665 TRGV11A0A075B6L2 103 aa9.15□□□□□ -0.94
HDAC6-229ENST00000486665 RNASE3P12724 160 aaKnown RBP9.15□□□□□ -0.94
HDAC6-229ENST00000486665 DNLZQ5SXM8 178 aa9.15□□□□□ -0.94
HDAC6-229ENST00000486665 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.94
HDAC6-229ENST00000486665 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
HDAC6-229ENST00000486665 C16orf74Q96GX8 76 aa9.15□□□□□ -0.94
HDAC6-229ENST00000486665 APOC3P02656 99 aa9.14□□□□□ -0.95
HDAC6-229ENST00000486665 ARMS2P0C7Q2 107 aa9.14□□□□□ -0.95
HDAC6-229ENST00000486665 ASIPP42127 132 aa9.14□□□□□ -0.95
HDAC6-229ENST00000486665 RPS20P60866 119 aaKnown RBP9.14□□□□□ -0.95
HDAC6-229ENST00000486665 RNF212Q495C1 297 aa9.14□□□□□ -0.95
HDAC6-229ENST00000486665 C15orf54Q8N8G6 183 aa9.14□□□□□ -0.95
HDAC6-229ENST00000486665 CLRN3Q8NCR9 226 aa9.14□□□□□ -0.95
HDAC6-229ENST00000486665 IL17DQ8TAD2 202 aa9.14□□□□□ -0.95
HDAC6-229ENST00000486665 TIMM8BQ9Y5J9 83 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-229ENST00000486665 ALMS1Q8TCU4 4167 aa9.13□□□□□ -0.95
HDAC6-229ENST00000486665 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
HDAC6-229ENST00000486665 H3BVH4 76 aa9.13□□□□□ -0.95
HDAC6-229ENST00000486665 CXCL1P09341 107 aa9.13□□□□□ -0.95
HDAC6-229ENST00000486665 S100A4P26447 101 aaKnown RBP9.13□□□□□ -0.95
HDAC6-229ENST00000486665 TCL1AP56279 114 aa9.13□□□□□ -0.95
HDAC6-229ENST00000486665 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
HDAC6-229ENST00000486665 GTSF1Q8WW33 167 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms