RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 Q6ZNX1 250 aa8.78□□□□□ -1
PTCD1-205ENST00000485746 HIST1H2BAQ96A08 127 aa8.78□□□□□ -1
PTCD1-205ENST00000485746 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
PTCD1-205ENST00000485746 H2AFB1P0C5Y9 115 aa8.77□□□□□ -1.01
PTCD1-205ENST00000485746 HOXA5P20719 270 aa8.77□□□□□ -1.01
PTCD1-205ENST00000485746 UBE2G1P62253 170 aa8.77□□□□□ -1.01
PTCD1-205ENST00000485746 EIF5AL1Q6IS14 154 aaKnown RBP8.77□□□□□ -1.01
PTCD1-205ENST00000485746 DPPA3Q6W0C5 159 aa8.77□□□□□ -1.01
PTCD1-205ENST00000485746 TCTE3Q8IZS6 198 aa8.77□□□□□ -1.01
PTCD1-205ENST00000485746 LINC00479Q96M42 142 aa8.77□□□□□ -1.01
PTCD1-205ENST00000485746 TRGV4A0A0C4DH28 118 aa8.76□□□□□ -1.01
PTCD1-205ENST00000485746 PAGE4O60829 102 aa8.76□□□□□ -1.01
PTCD1-205ENST00000485746 AKAP14Q86UN6 197 aa8.76□□□□□ -1.01
PTCD1-205ENST00000485746 IGHV3-16A0A0C4DH30 117 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 TEX46H3BTG2 121 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 M0R2P5 195 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 PAX4O43316 350 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 IGLV2-11P01706 119 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 C1QBP02746 253 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 TYMSP04818 313 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 PFN1P07737 140 aaKnown RBP8.75□□□□□ -1.01
PTCD1-205ENST00000485746 AKR1C3P42330 323 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 FAM3BP58499 235 aaPredicted RBP8.75□□□□□ -1.01
PTCD1-205ENST00000485746 SLAQ13239 276 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 TDRG1Q3Y452 100 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 LGALSLQ3ZCW2 172 aaPredicted RBP8.75□□□□□ -1.01
PTCD1-205ENST00000485746 MBD3L1Q8WWY6 194 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 C18orf15Q96N68 181 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 ARL2-SNX15V9GYD0 113 aa8.75□□□□□ -1.01
PTCD1-205ENST00000485746 FABP5P3A8MUU1 101 aa8.74□□□□□ -1.01
PTCD1-205ENST00000485746 S100A4P26447 101 aaKnown RBP8.74□□□□□ -1.01
PTCD1-205ENST00000485746 ZNF80P51504 273 aaPredicted RBP8.74□□□□□ -1.01
PTCD1-205ENST00000485746 FMC1Q96HJ9 113 aa8.74□□□□□ -1.01
PTCD1-205ENST00000485746 TCEAL7Q9BRU2 100 aa8.74□□□□□ -1.01
PTCD1-205ENST00000485746 HHLA3Q9XRX5 114 aa8.74□□□□□ -1.01
PTCD1-205ENST00000485746 C9JCJ5 164 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 H3BNG1 76 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 ORM1P02763 201 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 SFTA3P0C7M3 94 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 RAB5CP51148 216 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 Q86TA4 180 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 PRO0255Q9UI72 69 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 ZFP30Q9Y2G7 519 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 ICOSQ9Y6W8 199 aa8.73□□□□□ -1.01
PTCD1-205ENST00000485746 SLC51BQ86UW2 128 aa8.72□□□□□ -1.01
PTCD1-205ENST00000485746 PCNPQ8WW12 178 aaKnown RBP8.72□□□□□ -1.01
PTCD1-205ENST00000485746 RASL10AQ92737 203 aa8.72□□□□□ -1.01
PTCD1-205ENST00000485746 LINC00588Q9Y4M8 146 aa8.72□□□□□ -1.01
PTCD1-205ENST00000485746 HYDINQ4G0P3 5121 aa8.71□□□□□ -1.01
PTCD1-205ENST00000485746 TRAV4A0A0B4J268 109 aa8.71□□□□□ -1.02
PTCD1-205ENST00000485746 S100A9P06702 114 aaKnown RBP8.71□□□□□ -1.02
PTCD1-205ENST00000485746 FHL2Q14192 279 aa8.71□□□□□ -1.02
PTCD1-205ENST00000485746 VSIG2Q96IQ7 327 aa8.71□□□□□ -1.02
PTCD1-205ENST00000485746 ZNF479Q96JC4 524 aa8.71□□□□□ -1.02
PTCD1-205ENST00000485746 GNG13Q9P2W3 67 aa8.71□□□□□ -1.02
PTCD1-205ENST00000485746 C11orf21Q9P2W6 132 aa8.71□□□□□ -1.02
PTCD1-205ENST00000485746 A0A096LPF7 62 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 SCO2A0A1W2PP80 73 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 B4DEV8 164 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 ASIPP42127 132 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 CRYBA4P53673 196 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 MRPL23Q16540 153 aaKnown RBP8.7□□□□□ -1.02
PTCD1-205ENST00000485746 ESRGQ1W209 222 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 SOHLH1Q5JUK2 328 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 FAM162BQ5T6X4 162 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 ZC2HC1AQ96GY0 325 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 MANBALQ9NQG1 85 aa8.7□□□□□ -1.02
PTCD1-205ENST00000485746 M0R036 132 aa8.69□□□□□ -1.02
PTCD1-205ENST00000485746 SH2D1AO60880 128 aa8.69□□□□□ -1.02
PTCD1-205ENST00000485746 SULT1A2P50226 295 aa8.69□□□□□ -1.02
PTCD1-205ENST00000485746 LINC00336Q6ZUF6 198 aa8.69□□□□□ -1.02
PTCD1-205ENST00000485746 ZNRF2Q8NHG8 242 aa8.69□□□□□ -1.02
PTCD1-205ENST00000485746 Q9H8V8 135 aa8.69□□□□□ -1.02
PTCD1-205ENST00000485746 VPS13DQ5THJ4 4388 aa8.69□□□□□ -1.02
PTCD1-205ENST00000485746 TRBV6-1A0A0K0K1D8 114 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 LTAP01374 205 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 IFNA1P01562 189 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 GYPEP15421 78 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 SRIP30626 198 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 CCL20P78556 96 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 BAGE2Q86Y30 109 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 NHLRC2Q8NBF2 726 aa8.68□□□□□ -1.02
PTCD1-205ENST00000485746 TMSB15BA0A087X1C1 80 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 TRAV1-1A0A0B4J248 108 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 IGKV3D-20A0A0C4DH25 116 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 NBDYA0A0U1RRE5 68 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 GRIFINA4D1Z8 144 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 PGPEP1LA6NFU8 196 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 CRIP1P50238 77 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 NEGR1Q7Z3B1 354 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 SYT8Q8NBV8 401 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 C9orf85Q96MD7 179 aa8.67□□□□□ -1.02
PTCD1-205ENST00000485746 MRPS16Q9Y3D3 137 aaKnown RBP8.67□□□□□ -1.02
PTCD1-205ENST00000485746 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 KRBOX1C9JBD0 128 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 H3BVH4 76 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms