RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 WFDC1Q9HC57 220 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 NAGKQ9UJ70 344 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 RBAKDNA6NC62 111 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 HMGB3O15347 200 aaKnown RBP7.21□□□□□ -1.26
HMGN1-215ENST00000485550 GNRH2O43555 120 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 TAS2R45P59539 299 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 SLAQ13239 276 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 MRPL23Q16540 153 aaKnown RBP7.21□□□□□ -1.26
HMGN1-215ENST00000485550 KHDC3LQ587J8 217 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 FAM159AQ6UWV7 190 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 NEGR1Q7Z3B1 354 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 MARVELD1Q9BSK0 173 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 MBD2Q9UBB5 411 aa7.21□□□□□ -1.26
HMGN1-215ENST00000485550 TRBV7-9A0A0J9YWB2 115 aa7.2□□□□□ -1.26
HMGN1-215ENST00000485550 GYPEP15421 78 aa7.2□□□□□ -1.26
HMGN1-215ENST00000485550 Q6AWC8 147 aa7.2□□□□□ -1.26
HMGN1-215ENST00000485550 Q6ZRN7 208 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-215ENST00000485550 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
HMGN1-215ENST00000485550 CMTM2Q8TAZ6 248 aa7.2□□□□□ -1.26
HMGN1-215ENST00000485550 OTORQ9NRC9 128 aa7.2□□□□□ -1.26
HMGN1-215ENST00000485550 TRGV11A0A075B6L2 103 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 TRAV8-1A0A0A6YYK1 113 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 A0A1W2PPV4 95 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 F6UZH7 168 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 K7EQD1 137 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 PET100P0DJ07 73 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 SRIP30626 198 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 RAB2AP61019 212 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 GNG5P63218 68 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 PCNPQ8WW12 178 aaKnown RBP7.19□□□□□ -1.26
HMGN1-215ENST00000485550 SGK494Q96LW2 274 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 PTTG2Q9NZH5 202 aa7.19□□□□□ -1.26
HMGN1-215ENST00000485550 IGHV3-16A0A0C4DH30 117 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 LOC100131303A0A0U1RQF7 123 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 DEFA1P59665 94 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 DEFA3P59666 94 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 ACOT6Q3I5F7 207 aaPredicted RBP7.18□□□□□ -1.26
HMGN1-215ENST00000485550 WFDC10BQ8IUB3 73 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 OR4C5Q8NGB2 326 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 OR10G4Q8NGN3 311 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 RASL10AQ92737 203 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 TVP23CQ96ET8 276 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 SPXQ9BT56 116 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 TREM1Q9NP99 234 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 LENEPQ9Y5L5 61 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 LY96Q9Y6Y9 160 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 UBR4Q5T4S7 5183 aa7.18□□□□□ -1.26
HMGN1-215ENST00000485550 TRAV9-2A0A087WT02 112 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 TYMSP04818 313 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 KRTAP10-1P60331 282 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 HAMPP81172 84 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 FAM74A1Q5RGS3 127 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 IQCF2Q8IXL9 164 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 OR10G9Q8NGN4 311 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 OR10G7Q8NGN6 311 aa7.17□□□□□ -1.26
HMGN1-215ENST00000485550 TRAV4A0A0B4J268 109 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 TRAV21A0A0B4J279 112 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 C9JCJ5 164 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 M0R2P5 195 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 ERVFC1-1P60608 527 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 TDRG1Q3Y452 100 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 PQLC2Q6ZP29 291 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 HSD17B11Q8NBQ5 300 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 TMED6Q8WW62 240 aa7.16□□□□□ -1.26
HMGN1-215ENST00000485550 A0A087WTM6 91 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 ORM1P02763 201 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 ARL14EPLP0DKL9 152 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 EVI2AP22794 236 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 Q6ZSN1 163 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 NFE4Q86UQ8 179 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 NHLRC2Q8NBF2 726 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 SDF2L1Q9HCN8 221 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 MSRB1Q9NZV6 116 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 ALG5Q9Y673 324 aa7.15□□□□□ -1.26
HMGN1-215ENST00000485550 IGHV3-73A0A0B4J1V6 119 aa7.14□□□□□ -1.27
HMGN1-215ENST00000485550 CRYGDP07320 174 aa7.14□□□□□ -1.27
HMGN1-215ENST00000485550 CDC34P49427 236 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-215ENST00000485550 ZNF80P51504 273 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-215ENST00000485550 ASB13Q8WXK3 278 aa7.14□□□□□ -1.27
HMGN1-215ENST00000485550 TXNDC17Q9BRA2 123 aa7.14□□□□□ -1.27
HMGN1-215ENST00000485550 C11orf21Q9P2W6 132 aa7.14□□□□□ -1.27
HMGN1-215ENST00000485550 TCRAP04437 139 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 STAG3L2P0CL84 134 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 STAG3L3P0CL85 134 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 PPT1P50897 306 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
HMGN1-215ENST00000485550 ZNF876PQ49A33 203 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 DPPA3Q6W0C5 159 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 TMEM75Q8N9X5 138 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 RAB24Q969Q5 203 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 KCNS1Q96KK3 526 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 NDFIP1Q9BT67 221 aa7.13□□□□□ -1.27
HMGN1-215ENST00000485550 GCGP01275 180 aa7.12□□□□□ -1.27
HMGN1-215ENST00000485550 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
HMGN1-215ENST00000485550 ATP6V0CP27449 155 aa7.12□□□□□ -1.27
HMGN1-215ENST00000485550 GCHFRP30047 84 aa7.12□□□□□ -1.27
HMGN1-215ENST00000485550 Q5BKY6 102 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms