RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 ZNF19P17023 458 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 LGALS3P17931 250 aaKnown RBP4.28□□□□□ -1.72
KPNA1-208ENST00000485027 RPL30P62888 115 aaKnown RBP4.28□□□□□ -1.72
KPNA1-208ENST00000485027 RPS19BP1Q86WX3 136 aaKnown RBP4.28□□□□□ -1.72
KPNA1-208ENST00000485027 FER1L6-AS1Q8NA97 138 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 B9D2Q9BPU9 175 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 VAMP8Q9BV40 100 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 IL36BQ9NZH7 164 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 DOPEY2Q9Y3R5 2298 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 ZNF736B4DX44 427 aaPredicted RBP4.28□□□□□ -1.72
KPNA1-208ENST00000485027 FNDC10F2Z333 226 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 H0YGG7 62 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 SOCS1O15524 211 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 SERF1AO75920 110 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 CST7O76096 145 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 CYB5AP00167 134 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 CD7P09564 240 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 CATR1Q13166 79 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 LGALS9BQ3B8N2 356 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 RNASE13Q5GAN3 156 aaKnown RBP4.28□□□□□ -1.72
KPNA1-208ENST00000485027 LGALS9CQ6DKI2 356 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 MORN3Q6PF18 240 aaPredicted RBP4.28□□□□□ -1.72
KPNA1-208ENST00000485027 ZGRF1Q86YA3 2104 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 AQP3Q92482 292 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 FUT9Q9Y231 359 aa4.28□□□□□ -1.72
KPNA1-208ENST00000485027 DOPEY1Q5JWR5 2465 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 TRAV27A0A087WT01 109 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 TRAV13-1A0A0B4J241 112 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 K7EM74 188 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 K7ERJ3 54 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 YPEL1O60688 119 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 STATHP02808 62 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 PRM2P04554 102 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 NMUP48645 174 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 CCL20P78556 96 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 FOXF1Q12946 379 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 DEFB109BQ30KR1 87 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 LINC01554Q52M75 96 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 LINC00311Q8N616 119 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 YPEL2Q96QA6 119 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 SHANK2-AS3Q9BTD1 123 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 TMEM191AQ9H0A3 160 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 CST11Q9H112 138 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 TMEM106BQ9NUM4 274 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 ZNF835Q9Y2P0 537 aa4.27□□□□□ -1.73
KPNA1-208ENST00000485027 IGLV3-12A0A075B6K2 115 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 A0A0J9YW62 118 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 PIN1P1O15428 100 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 PRH1P02810 166 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 CD28P10747 220 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 PTHLHP12272 177 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 CRYGSP22914 178 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 GNB2P62879 340 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 LCNL1Q6ZST4 164 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 ZNF563Q8TA94 476 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 RBMXL1Q96E39 390 aaKnown RBP4.26□□□□□ -1.73
KPNA1-208ENST00000485027 DPH3Q96FX2 82 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 MRPL32Q9BYC8 188 aaKnown RBP4.26□□□□□ -1.73
KPNA1-208ENST00000485027 CMC2Q9NRP2 79 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 POLEQ07864 2286 aa4.26□□□□□ -1.73
KPNA1-208ENST00000485027 ESPL1Q14674 2120 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 IGLV7-46A0A075B6I9 117 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 MEIS3P1A6NDR6 274 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 A8MWV9 139 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 TPPP2P59282 170 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 HBBP68871 147 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 PLGLB1Q02325 96 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 SPATA12Q7Z6I5 190 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 APCDD1LQ8NCL9 501 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 LINC01006Q8NI28 216 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 C16orf95Q9H693 158 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 BCL2L10Q9HD36 194 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 ZNF586Q9NXT0 402 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 MYO9AB2RTY4 2548 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 DIDO1Q9BTC0 2240 aaKnown RBP4.25□□□□□ -1.73
KPNA1-208ENST00000485027 A0A0G2JMM0 328 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 A0A1W2PPB8 328 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 A0A1W2PRS3 328 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 KIR3DP1A8MWS1 328 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 SRRM5B3KS81 715 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 SFT2D2O95562 160 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 KRASP01116 189 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 ZNF688P0C7X2 276 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 DPPA3Q6W0C5 159 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 Q8N377 158 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 MDFICQ9P1T7 246 aa4.25□□□□□ -1.73
KPNA1-208ENST00000485027 PCNX1Q96RV3 2341 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 FREM3P0C091 2139 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 IGHV3OR15-7A0A075B7D8 119 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 IGKV1-16P04430 117 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 COX6A1P12074 109 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 ZNF93P35789 620 aaPredicted RBP4.24□□□□□ -1.73
KPNA1-208ENST00000485027 CSN1S1P47710 185 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 C18orf65Q6ZTR6 163 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 CEND1Q8N111 149 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 FDCSPQ8NFU4 85 aa4.24□□□□□ -1.73
KPNA1-208ENST00000485027 ITLN2Q8WWU7 325 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms