RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 ORM1P02763 201 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 RBMY1DP0C7P1 496 aaKnown RBP4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 IGHV4-30-4P0DP06 118 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 BTN1A1Q13410 526 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 OR5I1Q13606 314 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 CT83Q5H943 113 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 GFI1BQ5VTD9 330 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 FAM159AQ6UWV7 190 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 NUDT10Q8NFP7 164 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 NUDT11Q96G61 164 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 PYGO2Q9BRQ0 406 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 TMEM208Q9BTX3 173 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 TMEM242Q9NWH2 141 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 AURKAIP1Q9NWT8 199 aaPredicted RBP4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 XCL2Q9UBD3 114 aa4.77□□□□□ -1.65
PDZRN3-209ENST00000484487 TRAV12-2A0A075B6T6 113 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 FAM231BA6NCW3 169 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 ZNF705GA8MUZ8 300 aaPredicted RBP4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 A8MWL6 223 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 ZNF324O75467 553 aaPredicted RBP4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 CA1P00915 261 aaPredicted RBP4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 CXCL1P09341 107 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 CRIP1P50238 77 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 ZNF80P51504 273 aaPredicted RBP4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 FXYD7P58549 80 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 RPL19P84098 196 aaKnown RBP4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 TDRG1Q3Y452 100 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 RNF212Q495C1 297 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 OR2D3Q8NGH3 330 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 IMMP2LQ96T52 175 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 LINC00467Q9BRT7 94 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 RNASE7Q9H1E1 156 aaKnown RBP4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 RPS10P5Q9NQ39 176 aa4.76□□□□□ -1.65
PDZRN3-209ENST00000484487 TRGV11A0A075B6L2 103 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 IGHV1OR15-1A0A075B7D0 117 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 A0A1W2PPQ1 181 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 CXorf65A6NEN9 183 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 SMIM9A6NGZ8 99 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 CRXO43186 299 aaPredicted RBP4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 S100PP25815 95 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 PRR9Q5T870 116 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 KCNIP4Q6PIL6 250 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 LINC00322Q6ZN03 302 aaPredicted RBP4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 Q6ZWC4 215 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 BTF3L4Q96K17 158 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 LINC01587Q99440 93 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 GFRA4Q9GZZ7 299 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 NAGKQ9UJ70 344 aa4.75□□□□□ -1.65
PDZRN3-209ENST00000484487 TRAV9-1A0A075B6T8 112 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 CBY3A6NI87 242 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 F2Z2F3 143 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 FRMD6-AS1P0C7T7 363 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 MED14OSP0DP75 135 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 S100A4P26447 101 aaKnown RBP4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 ASIPP42127 132 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 KIR3DS1Q14943 382 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 ANXA2RQ3ZCQ2 193 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 DEFB121Q5J5C9 76 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 MUC21Q5SSG8 566 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 DNLZQ5SXM8 178 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 ZNF493Q6ZR52 646 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 CSNK1G2-AS1Q8NCQ2 148 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 TSKUQ8WUA8 353 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 BORCS7Q96B45 105 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 RCHY1Q96PM5 261 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 SMCO4Q9NRQ5 59 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 IL36BQ9NZH7 164 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 NAT8BQ9UHF3 227 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 TP53TG1Q9Y2A0 90 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 V9GYV3 84 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 MUC4Q99102 2169 aa4.74□□□□□ -1.65
PDZRN3-209ENST00000484487 IGHV3OR16-12A0A075B7B8 117 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 TMSB15BA0A087X1C1 80 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 IGKV3D-20A0A0C4DH25 116 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 SMIM27A0A1W2PRY6 76 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 K7EIL1 84 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 GIG44P09565 113 aaPredicted RBP4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 FOXA3P55318 350 aaPredicted RBP4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 ZNF415Q09FC8 603 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 RRN3P1Q2M238 152 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 WDR73Q6P4I2 378 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 ZNF705AQ6ZN79 300 aaPredicted RBP4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 C1orf158Q8N1D5 194 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 RNF183Q96D59 192 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 NEU1Q99519 415 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 C11orf21Q9P2W6 132 aa4.73□□□□□ -1.65
PDZRN3-209ENST00000484487 A0A1B0GW15 77 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 GRIFINA4D1Z8 144 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 SNURFLB1AK76 121 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 GNRH2O43555 120 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 SPRY2O43597 315 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 TYMSP04818 313 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 S100A8P05109 93 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 OR5AL1P0C617 328 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 RBMY1A1P0DJD3 496 aaKnown RBP4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 RBMY1CP0DJD4 496 aa4.72□□□□□ -1.65
PDZRN3-209ENST00000484487 MIFP14174 115 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms