RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LINC00322Q6ZN03 302 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-204ENST00000483941 BORCS7Q96B45 105 aa10.28□□□□□ -0.76
SMAD9-204ENST00000483941 KIR2DL5BA0A0G2JN68 375 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 KIR2DL5BA0A0G2JPC4 375 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 K7EIL1 84 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 M0R2Z0 102 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 APOC4P55056 127 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 BTN1A1Q13410 526 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 GFI1BQ5VTD9 330 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 KIR2DL5AQ8N109 375 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 DEFB125Q8N687 156 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 KIR2DL5BQ8NHK3 375 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 SRD5A3Q9H8P0 318 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 LYSTQ99698 3801 aa10.27□□□□□ -0.77
SMAD9-204ENST00000483941 DNAH1Q9P2D7 4330 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 LOC102724200A0A096LPH7 203 aaPredicted RBP10.26□□□□□ -0.77
SMAD9-204ENST00000483941 TRAV12-3A0A0B4J271 114 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 SMIM27A0A1W2PRY6 76 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 F2Z2F3 143 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 ZNF324O75467 553 aaPredicted RBP10.26□□□□□ -0.77
SMAD9-204ENST00000483941 FOXA3P55318 350 aaPredicted RBP10.26□□□□□ -0.77
SMAD9-204ENST00000483941 TDRG1Q3Y452 100 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 COX19Q49B96 90 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 TMEM88Q6PEY1 159 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 PYGO2Q9BRQ0 406 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 GOLT1BQ9Y3E0 138 aa10.26□□□□□ -0.77
SMAD9-204ENST00000483941 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
SMAD9-204ENST00000483941 PRR9Q5T870 116 aa10.25□□□□□ -0.77
SMAD9-204ENST00000483941 Q8N1Y9 231 aa10.25□□□□□ -0.77
SMAD9-204ENST00000483941 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
SMAD9-204ENST00000483941 TMEM208Q9BTX3 173 aa10.25□□□□□ -0.77
SMAD9-204ENST00000483941 NAGKQ9UJ70 344 aa10.25□□□□□ -0.77
SMAD9-204ENST00000483941 TRGV11A0A075B6L2 103 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 TRBV24-1A0A075B6N3 115 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 IGHV1OR15-1A0A075B7D0 117 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 A0A1B0GW15 77 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 RBMY1BA6NDE4 496 aaKnown RBP10.24□□□□□ -0.77
SMAD9-204ENST00000483941 RBMY1EA6NEQ0 496 aaKnown RBP10.24□□□□□ -0.77
SMAD9-204ENST00000483941 UBE2CO00762 179 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 SCO1O75880 301 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 S100A8P05109 93 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 RBMY1DP0C7P1 496 aaKnown RBP10.24□□□□□ -0.77
SMAD9-204ENST00000483941 MED14OSP0DP75 135 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 RPL35AP18077 110 aaKnown RBP10.24□□□□□ -0.77
SMAD9-204ENST00000483941 S100A4P26447 101 aaKnown RBP10.24□□□□□ -0.77
SMAD9-204ENST00000483941 ASIPP42127 132 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 ATP5L2Q7Z4Y8 100 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 CBLN2Q8IUK8 224 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 LINC01587Q99440 93 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 NEU1Q99519 415 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
SMAD9-204ENST00000483941 IGKV3D-20A0A0C4DH25 116 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 HIGD1CA8MV81 97 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 A8MZ25 164 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 CRXO43186 299 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-204ENST00000483941 FXYD7P58549 80 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 ELOBQ15370 118 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 ANXA2RQ3ZCQ2 193 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 DEFB121Q5J5C9 76 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 DNLZQ5SXM8 178 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 WDR73Q6P4I2 378 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 RASL11AQ6T310 242 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 FER1L6-AS1Q8NA97 138 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 WFDC10AQ9H1F0 79 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
SMAD9-204ENST00000483941 TMSB15BA0A087X1C1 80 aa10.22□□□□□ -0.77
SMAD9-204ENST00000483941 CA1P00915 261 aaPredicted RBP10.22□□□□□ -0.77
SMAD9-204ENST00000483941 FAM3BP58499 235 aaPredicted RBP10.22□□□□□ -0.77
SMAD9-204ENST00000483941 CACNG7P62955 275 aa10.22□□□□□ -0.77
SMAD9-204ENST00000483941 RIGQ13278 110 aa10.22□□□□□ -0.77
SMAD9-204ENST00000483941 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
SMAD9-204ENST00000483941 HUWE1Q7Z6Z7 4374 aaKnown RBP10.21□□□□□ -0.77
SMAD9-204ENST00000483941 A0A1B0GUT8 65 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 CBY3A6NI87 242 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 OR5AL1P0C617 328 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 TCL1AP56279 114 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 KRTAP10-11P60412 298 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 KIR3DS1Q14943 382 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 MUC21Q5SSG8 566 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 FAM210BQ96KR6 192 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 B9D2Q9BPU9 175 aa10.21□□□□□ -0.77
SMAD9-204ENST00000483941 IGHV4-30-4P0DP06 118 aa10.2□□□□□ -0.78
SMAD9-204ENST00000483941 GTSF1Q8WW33 167 aa10.2□□□□□ -0.78
SMAD9-204ENST00000483941 PGLYRP4Q96LB8 373 aa10.2□□□□□ -0.78
SMAD9-204ENST00000483941 TPPP3Q9BW30 176 aa10.2□□□□□ -0.78
SMAD9-204ENST00000483941 C11orf21Q9P2W6 132 aa10.2□□□□□ -0.78
SMAD9-204ENST00000483941 STAB2Q8WWQ8 2551 aa10.2□□□□□ -0.78
SMAD9-204ENST00000483941 GRIFINA4D1Z8 144 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 TYMSP04818 313 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 IGLC6P0CF74 106 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 GZMBP10144 247 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 CTRLP40313 264 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 ZNF493Q6ZR52 646 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 SMIM15Q7Z3B0 74 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 SSBP4Q9BWG4 385 aaPredicted RBP10.19□□□□□ -0.78
SMAD9-204ENST00000483941 PHLDA3Q9Y5J5 127 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 AGRNO00468 2067 aa10.19□□□□□ -0.78
SMAD9-204ENST00000483941 SMIM9A6NGZ8 99 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 COLCA2A8K830 154 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms