RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 PGLYRP4Q96LB8 373 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 C20orf173Q96LM9 149 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 DUX5Q96PT3 197 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 LYSTQ99698 3801 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 SSBP4Q9BWG4 385 aaPredicted RBP4.06□□□□□ -1.76
COL17A1-206ENST00000483876 MS4A6AQ9H2W1 248 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 TSSC4Q9Y5U2 329 aaPredicted RBP4.06□□□□□ -1.76
COL17A1-206ENST00000483876 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 TRAV21A0A0B4J279 112 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 IFITM10A6NMD0 228 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 SPINK4O60575 86 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 DUSP14O95147 198 aaKnown RBP4.05□□□□□ -1.76
COL17A1-206ENST00000483876 ORM1P02763 201 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 CSN3P07498 182 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 OR5AL1P0C617 328 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 SMIM6P0DI80 62 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 CTRLP40313 264 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 ZNF80P51504 273 aaPredicted RBP4.05□□□□□ -1.76
COL17A1-206ENST00000483876 CMC4P56277 68 aaPredicted RBP4.05□□□□□ -1.76
COL17A1-206ENST00000483876 RAB4BP61018 213 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 GDF5OSQ5U4N7 250 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 MRPL54Q6P161 138 aaKnown RBP4.05□□□□□ -1.76
COL17A1-206ENST00000483876 ADAMTSL5Q6ZMM2 481 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 ZFAND2AQ8N6M9 145 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 TMEM18Q96B42 140 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 CLUHP3Q96NS8 147 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 ALKBH7Q9BT30 221 aaPredicted RBP4.05□□□□□ -1.76
COL17A1-206ENST00000483876 GPR61Q9BZJ8 451 aa4.05□□□□□ -1.76
COL17A1-206ENST00000483876 KIAA1109Q2LD37 5005 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 LOC102724200A0A096LPH7 203 aaPredicted RBP4.04□□□□□ -1.76
COL17A1-206ENST00000483876 IGKV3D-20A0A0C4DH25 116 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 A0A0J9YX75 114 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 A8MTW9 85 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 KLLNB2CW77 178 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 CCL24O00175 119 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 GPX1P07203 203 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 MED14OSP0DP75 135 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 TSPOP30536 169 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 CAMPP49913 170 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 AKR1D1P51857 326 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 PROK1P58294 105 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 CACNG7P62955 275 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 SLAQ13239 276 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 DEFB114Q30KQ6 69 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 EBLN2Q6P2I7 272 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 LYZL1Q6UWQ5 148 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 FOXI2Q6ZQN5 318 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 BAGE3Q86Y29 109 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 FER1L6-AS1Q8NA97 138 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 KLHL30-AS1Q8NEE0 82 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 Q8TAT8 98 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 DLX4Q92988 240 aaPredicted RBP4.04□□□□□ -1.76
COL17A1-206ENST00000483876 RAX2Q96IS3 184 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 HIST1H2BLQ99880 126 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 SPAG8Q99932 426 aaPredicted RBP4.04□□□□□ -1.76
COL17A1-206ENST00000483876 TMEM191AQ9H0A3 160 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 RNF114Q9Y508 228 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 U3KQK5 164 aa4.04□□□□□ -1.76
COL17A1-206ENST00000483876 SNAI2O43623 268 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 AMBPP02760 352 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 PPBPP02775 128 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 ARMS2P0C7Q2 107 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 GZMBP10144 247 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 CD28P10747 220 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 PMCHP20382 165 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 NTF3P20783 257 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 LEPP41159 167 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 SLURP1P55000 103 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 TDRG1Q3Y452 100 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 OXLD1Q5BKU9 147 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 GFI1BQ5VTD9 330 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 FAM104BQ5XKR9 115 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 C18orf65Q6ZTR6 163 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 OR2K2Q8NGT1 345 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 KCNS1Q96KK3 526 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 FAM110AQ9BQ89 295 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 TP53TG3Q9ULZ0 132 aa4.03□□□□□ -1.76
COL17A1-206ENST00000483876 OR4C46A6NHA9 309 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 K7EIL1 84 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 ZNF324O75467 553 aaPredicted RBP4.02□□□□□ -1.77
COL17A1-206ENST00000483876 ZNF705DP0CH99 300 aaPredicted RBP4.02□□□□□ -1.77
COL17A1-206ENST00000483876 ZNF705BP0CI00 300 aaPredicted RBP4.02□□□□□ -1.77
COL17A1-206ENST00000483876 FABP4P15090 132 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 RAB4AP20338 218 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 EDN2P20800 178 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 SRIP30626 198 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 CDKN1BP46527 198 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 KRTAP10-3P60369 221 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 JOSD1Q15040 202 aaPredicted RBP4.02□□□□□ -1.77
COL17A1-206ENST00000483876 DEFB136Q30KP8 78 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 KIAA1644Q3SXP7 199 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 PSMG4Q5JS54 123 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 NDUFA11Q86Y39 141 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 WFDC3Q8IUB2 231 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 TMEM256Q8N2U0 113 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 DEFB125Q8N687 156 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 OR10D4PQ8NGN7 298 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 C18orf32Q8TCD1 76 aa4.02□□□□□ -1.77
COL17A1-206ENST00000483876 CHCHD1Q96BP2 118 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms