RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 C18orf65Q6ZTR6 163 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 Q8TAT8 98 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 TRAV30A0A087WSZ9 112 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 TMEM189A5PLL7 270 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 FAM223BA6NKX1 122 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 LTAP01374 205 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 ELANEP08246 267 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 ATP5L2Q7Z4Y8 100 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 FAM223AQ8IWN6 122 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 ATP6V0BQ99437 205 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
LIMK1-205ENST00000483414 C2orf70A6NJV1 201 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 SYS1-DBNDD2H3BUS1 97 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 J3KRW8 73 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 MFAP4P55083 255 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 TWIST1Q15672 202 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 HIST2H2BDQ6DRA6 164 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 URB1-AS1Q96HZ7 61 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 PKD1L1Q8TDX9 2849 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 ATRQ13535 2644 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 FAM231BA6NCW3 169 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 H3BUT2 72 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 TRBV19A0A075B6N1 114 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 TMEM213A2RRL7 107 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 SMKR1H3BMG3 65 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 CD28P10747 220 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 MYCNOSP40205 109 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 FHL3Q13643 280 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 MLST8Q9BVC4 326 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 MRPS16Q9Y3D3 137 aaKnown RBP7.36□□□□□ -1.23
LIMK1-205ENST00000483414 KLF12Q9Y4X4 402 aa7.36□□□□□ -1.23
LIMK1-205ENST00000483414 PRSS47A8MTI9 375 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 TRBV12-3P01733 135 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 RHOGP84095 191 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 SLC25A34Q6PIV7 304 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 LYZL1Q6UWQ5 148 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 GTSF1LQ9H1H1 148 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 HLA-DMBP28068 263 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 C15orf32Q32M92 178 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
LIMK1-205ENST00000483414 UBE2E2Q96LR5 201 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 C21orf62Q9NYP8 219 aa7.35□□□□□ -1.23
LIMK1-205ENST00000483414 C7orf71A4D174 169 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 NCR2O95944 276 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 IFI27P40305 119 aaPredicted RBP7.34□□□□□ -1.23
LIMK1-205ENST00000483414 RPL24P83731 157 aaKnown RBP7.34□□□□□ -1.23
LIMK1-205ENST00000483414 AMN1Q8IY45 258 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 C18orf15Q96N68 181 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 SHANK2-AS3Q9BTD1 123 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 THYN1Q9P016 225 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 HSPB8Q9UJY1 196 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 D6R8Y8 96 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 PPBPP02775 128 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 CTSGP08311 255 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 GPR183P32249 361 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 CKS2P33552 79 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 SMAGPQ0VAQ4 97 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 USMG5Q96IX5 58 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 A0A1B0GXF2 115 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 GAGE10A6NGK3 116 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 KLF5Q13887 457 aaPredicted RBP7.34□□□□□ -1.23
LIMK1-205ENST00000483414 PSG3Q16557 428 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 C4orf3Q8WVX3 66 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 TTTY13Q9BZ97 58 aa7.34□□□□□ -1.23
LIMK1-205ENST00000483414 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 TMEM75Q8N9X5 138 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 CHCHD1Q96BP2 118 aaKnown RBP7.33□□□□□ -1.24
LIMK1-205ENST00000483414 PRELID3AQ96N28 172 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 TRBV7-1A0A0A6YYK4 115 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 TRGV3P03979 118 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 AP1S3Q96PC3 154 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 CITED2Q99967 270 aaPredicted RBP7.33□□□□□ -1.24
LIMK1-205ENST00000483414 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 ZNF492Q9P255 531 aa7.33□□□□□ -1.24
LIMK1-205ENST00000483414 LGALS1P09382 135 aaKnown RBP7.32□□□□□ -1.24
LIMK1-205ENST00000483414 RPL11P62913 178 aaKnown RBP7.32□□□□□ -1.24
LIMK1-205ENST00000483414 ERCC8Q13216 396 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 C16orf54Q6UWD8 224 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 FER1L6-AS1Q8NA97 138 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 OR10AG1Q8NH19 301 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 K7ERU9 68 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 SCGB2A1O75556 95 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 SIGLEC15Q6ZMC9 328 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 MDFIQ99750 246 aa7.32□□□□□ -1.24
LIMK1-205ENST00000483414 H3BRN7 92 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 SH2D1AO60880 128 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 NMUP48645 174 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 CRIP1P50238 77 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 DEFB125Q8N687 156 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 ZNF747Q9BV97 191 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 RABAC1Q9UI14 185 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 STAB1Q9NY15 2570 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 IGLV2-11P01706 119 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 CLEC3BP05452 202 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 RPL7P18124 248 aaKnown RBP7.31□□□□□ -1.24
LIMK1-205ENST00000483414 EVI2AP22794 236 aa7.31□□□□□ -1.24
LIMK1-205ENST00000483414 PLP1P60201 277 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms