RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 NKX2-5P52952 324 aaPredicted RBP9.43□□□□□ -0.9
SSR1-208ENST00000483409 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
SSR1-208ENST00000483409 Q86TA4 180 aa9.43□□□□□ -0.9
SSR1-208ENST00000483409 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
SSR1-208ENST00000483409 ARL2-SNX15V9GYD0 113 aa9.43□□□□□ -0.9
SSR1-208ENST00000483409 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
SSR1-208ENST00000483409 GNRH2O43555 120 aa9.42□□□□□ -0.9
SSR1-208ENST00000483409 SAPCD1Q5SSQ6 148 aa9.42□□□□□ -0.9
SSR1-208ENST00000483409 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
SSR1-208ENST00000483409 DNAH6Q9C0G6 4158 aa9.42□□□□□ -0.9
SSR1-208ENST00000483409 TYMSP04818 313 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 AKR1C3P42330 323 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 UBE2G1P62253 170 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 CCL20P78556 96 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 OR5I1Q13606 314 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 TDRG1Q3Y452 100 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 TCEAL7Q9BRU2 100 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 C11orf21Q9P2W6 132 aa9.41□□□□□ -0.9
SSR1-208ENST00000483409 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
SSR1-208ENST00000483409 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
SSR1-208ENST00000483409 PFN1P07737 140 aaKnown RBP9.4□□□□□ -0.9
SSR1-208ENST00000483409 HOXA5P20719 270 aa9.4□□□□□ -0.9
SSR1-208ENST00000483409 C15orf53Q8NAA6 179 aa9.4□□□□□ -0.9
SSR1-208ENST00000483409 FMC1Q96HJ9 113 aa9.4□□□□□ -0.9
SSR1-208ENST00000483409 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
SSR1-208ENST00000483409 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 TEX46H3BTG2 121 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 NUDT3O95989 172 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 IGHV3-53P01767 116 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 P0DMU3 169 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 FAM231AP0DMU4 169 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 FAM231CP0DMU5 169 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 LGALS9BQ3B8N2 356 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 MANBALQ9NQG1 85 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
SSR1-208ENST00000483409 A0A0J9YY99 117 aa9.38□□□□□ -0.91
SSR1-208ENST00000483409 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
SSR1-208ENST00000483409 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
SSR1-208ENST00000483409 ZC2HC1AQ96GY0 325 aa9.38□□□□□ -0.91
SSR1-208ENST00000483409 C18orf15Q96N68 181 aa9.38□□□□□ -0.91
SSR1-208ENST00000483409 SPXQ9BT56 116 aa9.38□□□□□ -0.91
SSR1-208ENST00000483409 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
SSR1-208ENST00000483409 TRBV6-1A0A0K0K1D8 114 aa9.37□□□□□ -0.91
SSR1-208ENST00000483409 LTAP01374 205 aa9.37□□□□□ -0.91
SSR1-208ENST00000483409 NHLRC2Q8NBF2 726 aa9.37□□□□□ -0.91
SSR1-208ENST00000483409 FABP5P3A8MUU1 101 aa9.36□□□□□ -0.91
SSR1-208ENST00000483409 M0R2P5 195 aa9.36□□□□□ -0.91
SSR1-208ENST00000483409 SH2D1AO60880 128 aa9.36□□□□□ -0.91
SSR1-208ENST00000483409 CRIP1P50238 77 aa9.36□□□□□ -0.91
SSR1-208ENST00000483409 POM121L12Q8N7R1 296 aa9.36□□□□□ -0.91
SSR1-208ENST00000483409 RASL10AQ92737 203 aa9.36□□□□□ -0.91
SSR1-208ENST00000483409 IGKV3D-20A0A0C4DH25 116 aa9.35□□□□□ -0.91
SSR1-208ENST00000483409 M0R036 132 aa9.35□□□□□ -0.91
SSR1-208ENST00000483409 ORM1P02763 201 aa9.35□□□□□ -0.91
SSR1-208ENST00000483409 SFTA3P0C7M3 94 aa9.35□□□□□ -0.91
SSR1-208ENST00000483409 FAM162BQ5T6X4 162 aa9.35□□□□□ -0.91
SSR1-208ENST00000483409 COX8CQ7Z4L0 72 aa9.35□□□□□ -0.91
SSR1-208ENST00000483409 B4DEV8 164 aa9.34□□□□□ -0.91
SSR1-208ENST00000483409 C9JCJ5 164 aa9.34□□□□□ -0.91
SSR1-208ENST00000483409 IFNA1P01562 189 aa9.34□□□□□ -0.91
SSR1-208ENST00000483409 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.91
SSR1-208ENST00000483409 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
SSR1-208ENST00000483409 C11orf52Q96A22 123 aa9.34□□□□□ -0.91
SSR1-208ENST00000483409 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
SSR1-208ENST00000483409 ZNF479Q96JC4 524 aa9.34□□□□□ -0.91
SSR1-208ENST00000483409 C9orf85Q96MD7 179 aa9.34□□□□□ -0.91
SSR1-208ENST00000483409 DERL1Q9BUN8 251 aa9.34□□□□□ -0.91
SSR1-208ENST00000483409 TRGV4A0A0C4DH28 118 aa9.33□□□□□ -0.92
SSR1-208ENST00000483409 BCL2P10415 239 aa9.33□□□□□ -0.92
SSR1-208ENST00000483409 S100A4P26447 101 aaKnown RBP9.33□□□□□ -0.92
SSR1-208ENST00000483409 RPL35P42766 123 aaKnown RBP9.33□□□□□ -0.92
SSR1-208ENST00000483409 MEF2BQ02080 365 aaPredicted RBP9.33□□□□□ -0.92
SSR1-208ENST00000483409 FHL2Q14192 279 aa9.33□□□□□ -0.92
SSR1-208ENST00000483409 ZNF674Q2M3X9 581 aa9.33□□□□□ -0.92
SSR1-208ENST00000483409 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
SSR1-208ENST00000483409 BAGE2Q86Y30 109 aa9.33□□□□□ -0.92
SSR1-208ENST00000483409 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
SSR1-208ENST00000483409 TMSB15BA0A087X1C1 80 aa9.32□□□□□ -0.92
SSR1-208ENST00000483409 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
SSR1-208ENST00000483409 KRBOX1C9JBD0 128 aa9.32□□□□□ -0.92
SSR1-208ENST00000483409 PAX4O43316 350 aa9.32□□□□□ -0.92
SSR1-208ENST00000483409 ASIPP42127 132 aa9.32□□□□□ -0.92
SSR1-208ENST00000483409 RNF212Q495C1 297 aa9.32□□□□□ -0.92
SSR1-208ENST00000483409 OR4C5Q8NGB2 326 aa9.32□□□□□ -0.92
SSR1-208ENST00000483409 IGLV2-18A0A075B6J9 118 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 GRIFINA4D1Z8 144 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 PGPEP1LA6NFU8 196 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 H3BNG1 76 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 H3BVH4 76 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 M0R2N4 97 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 CRYBA4P53673 196 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 CCL18P55774 89 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 BLOC1S1P78537 153 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 ZNF506Q5JVG8 444 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
SSR1-208ENST00000483409 MLST8Q9BVC4 326 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms