RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 WI2-2373I1.2A0A1W2PRP0 233 aa9.67□□□□□ -0.86
CCDC78-213ENST00000482878 TIMM23O14925 209 aa9.67□□□□□ -0.86
CCDC78-213ENST00000482878 LY6LH3BQJ8 138 aa9.67□□□□□ -0.86
CCDC78-213ENST00000482878 Q6AWC8 147 aa9.67□□□□□ -0.86
CCDC78-213ENST00000482878 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
CCDC78-213ENST00000482878 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
CCDC78-213ENST00000482878 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 PRTN3P24158 256 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
CCDC78-213ENST00000482878 HHLA3Q9XRX5 114 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 ZNF462Q96JM2 2506 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 IGHV3-23P01764 117 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE2BQ13066 116 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE2EQ4V326 116 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 LYPD1Q8N2G4 141 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 MRPL35Q9NZE8 188 aaKnown RBP9.66□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE2DQ9UEU5 116 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 SCGB1C2P0DMR2 95 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 TMEM158Q8WZ71 300 aa9.66□□□□□ -0.86
CCDC78-213ENST00000482878 DCHS2Q6V1P9 2916 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE12JA6NER3 117 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE7O76087 117 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE12FP0CL80 117 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE12GP0CL81 117 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE12IP0CL82 117 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 GAGE4Q13068 117 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 SRSF9Q13242 221 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC78-213ENST00000482878 FLNCQ14315 2725 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 SNCGO76070 127 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 CFAP126Q5VTH2 177 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 SCGB1D4Q6XE38 83 aa9.65□□□□□ -0.86
CCDC78-213ENST00000482878 CCDC179H3BU77 68 aa9.65□□□□□ -0.87
CCDC78-213ENST00000482878 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.87
CCDC78-213ENST00000482878 PSMG4Q5JS54 123 aa9.65□□□□□ -0.87
CCDC78-213ENST00000482878 ZNF493Q6ZR52 646 aa9.65□□□□□ -0.87
CCDC78-213ENST00000482878 CRYBG3Q68DQ2 2970 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 B9A039 149 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 ZFP2Q6ZN57 461 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 MYOZ3Q8TDC0 251 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 RNF5Q99942 180 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 HIF1ANQ9NWT6 349 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 TRAV8-2A0A0B4J237 113 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 NBL1P41271 181 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
CCDC78-213ENST00000482878 LINC01548A6NM66 108 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 K7ENP7 123 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 ATP5LO75964 103 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 ZNF688P0C7X2 276 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 CDSNQ15517 529 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 FAM110AQ9BQ89 295 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 A8MWV9 139 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 NBR2O15453 112 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 SH2D1AO60880 128 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 SRSF1Q07955 248 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC78-213ENST00000482878 TAL2Q16559 108 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 TIMD4Q96H15 378 aa9.63□□□□□ -0.87
CCDC78-213ENST00000482878 IGKV2-40A0A087WW87 121 aaPredicted RBP9.63□□□□□ -0.87
CCDC78-213ENST00000482878 IGKV2D-40P01614 121 aaPredicted RBP9.63□□□□□ -0.87
CCDC78-213ENST00000482878 IGHV3OR16-13A0A075B7E8 117 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 IGHV3-74A0A0B4J1X5 117 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 TEN1Q86WV5 123 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 FANCD2OSQ96PS1 177 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 AAMDCQ9H7C9 122 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 U3KQK5 164 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 F8W735 103 aaPredicted RBP9.62□□□□□ -0.87
CCDC78-213ENST00000482878 GATA1P15976 413 aaPredicted RBP9.62□□□□□ -0.87
CCDC78-213ENST00000482878 CFHR4Q92496 578 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 CARD19Q96LW7 228 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 KLK15Q9H2R5 256 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 ZNF672Q499Z4 452 aaPredicted RBP9.62□□□□□ -0.87
CCDC78-213ENST00000482878 C3orf56Q8N813 242 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 MTORP42345 2549 aa9.62□□□□□ -0.87
CCDC78-213ENST00000482878 GAS8-AS1O95177 125 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 HLA-DRB4P13762 266 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 PDE6HQ13956 83 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 MORN3Q6PF18 240 aaPredicted RBP9.61□□□□□ -0.87
CCDC78-213ENST00000482878 TMEM190Q8WZ59 177 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 MSRB1Q9NZV6 116 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 HLA-DRB4X5D2U9 266 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 ORM1P02763 201 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 IGFL4Q6B9Z1 124 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 TMEM262E9PQX1 116 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 Q8TAT8 98 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 RAB1BQ9H0U4 201 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 DPM3Q9P2X0 92 aa9.61□□□□□ -0.87
CCDC78-213ENST00000482878 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 EGR2P11161 476 aaPredicted RBP9.6□□□□□ -0.87
CCDC78-213ENST00000482878 NDUFV3P56181 108 aaKnown RBP9.6□□□□□ -0.87
CCDC78-213ENST00000482878 VCX2Q9H322 139 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 TNFRSF6BO95407 300 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
CCDC78-213ENST00000482878 NDPQ00604 133 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 PAX8Q06710 450 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 C1orf122Q6ZSJ8 110 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 ANKRD29Q8N6D5 301 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 NPBQ8NG41 125 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 PIFOQ8TCI5 191 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 PRR25Q96S07 402 aa9.6□□□□□ -0.87
CCDC78-213ENST00000482878 NXT2Q9NPJ8 142 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms