RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PRO0255Q9UI72 69 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 KMT2AQ03164 3969 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 A0A0D9SG52 128 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 KANTRA0A1W2PQU2 76 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 FAM74A7A6NL05 159 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 PAX4O43316 350 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 GNRH2O43555 120 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 GCGP01275 180 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 TYMSP04818 313 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 PFN1P07737 140 aaKnown RBP8.24□□□□□ -1.09
HMGN1-213ENST00000482192 PPT1P50897 306 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 UBE2G2P60604 165 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 ESRGQ1W209 222 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 SMUG1Q53HV7 270 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 OR11H4Q8NGC9 324 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 STOML3Q8TAV4 291 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 C8orf49Q96NF6 230 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 UPK3BQ9BT76 320 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 HHLA3Q9XRX5 114 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
HMGN1-213ENST00000482192 A0A096LPF7 62 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 TRGV4A0A0C4DH28 118 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 UMAD1C9J7I0 102 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 M0R2P5 195 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 PEX7O00628 323 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 BCL2L11O43521 198 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 SEC11BP0C7V7 166 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 ZNF80P51504 273 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-213ENST00000482192 CRYBA4P53673 196 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 FHL2Q14192 279 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 HIST1H2BAQ96A08 127 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 ZNF471Q9BX82 626 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-213ENST00000482192 Q9H8V8 135 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 MRPS16Q9Y3D3 137 aaKnown RBP8.23□□□□□ -1.09
HMGN1-213ENST00000482192 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
HMGN1-213ENST00000482192 NACAE9PAV3 2078 aa8.22□□□□□ -1.09
HMGN1-213ENST00000482192 FHITP49789 147 aa8.22□□□□□ -1.09
HMGN1-213ENST00000482192 EIF5AP63241 154 aaKnown RBP8.22□□□□□ -1.09
HMGN1-213ENST00000482192 ZNF479Q96JC4 524 aa8.22□□□□□ -1.09
HMGN1-213ENST00000482192 LINC00479Q96M42 142 aa8.22□□□□□ -1.09
HMGN1-213ENST00000482192 TCEAL7Q9BRU2 100 aa8.22□□□□□ -1.09
HMGN1-213ENST00000482192 ARL2-SNX15V9GYD0 113 aa8.22□□□□□ -1.09
HMGN1-213ENST00000482192 VPS13DQ5THJ4 4388 aa8.22□□□□□ -1.09
HMGN1-213ENST00000482192 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 TRAV34A0A0B4J273 112 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 A0A1B0GVY2 172 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 PFDN1O60925 122 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 SFTA3P0C7M3 94 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
HMGN1-213ENST00000482192 TTC32Q5I0X7 151 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 Q86TA4 180 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 OR4C5Q8NGB2 326 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 C11orf21Q9P2W6 132 aa8.21□□□□□ -1.1
HMGN1-213ENST00000482192 ORM1P02763 201 aa8.2□□□□□ -1.1
HMGN1-213ENST00000482192 ZNF876PQ49A33 203 aa8.2□□□□□ -1.1
HMGN1-213ENST00000482192 CST9LP1Q5W188 147 aa8.2□□□□□ -1.1
HMGN1-213ENST00000482192 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
HMGN1-213ENST00000482192 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
HMGN1-213ENST00000482192 FAM213BQ8TBF2 198 aa8.2□□□□□ -1.1
HMGN1-213ENST00000482192 PCNPQ8WW12 178 aaKnown RBP8.2□□□□□ -1.1
HMGN1-213ENST00000482192 A0A1W2PPQ1 181 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 C9JCJ5 164 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 TPT1P13693 172 aaKnown RBP8.19□□□□□ -1.1
HMGN1-213ENST00000482192 SRIP30626 198 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 UBE2G1P62253 170 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 TMUB2Q71RG4 321 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 NEGR1Q7Z3B1 354 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 SFT2D1Q8WV19 159 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 MBD3L1Q8WWY6 194 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 FMC1Q96HJ9 113 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 C9orf85Q96MD7 179 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 ZFP30Q9Y2G7 519 aa8.19□□□□□ -1.1
HMGN1-213ENST00000482192 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
HMGN1-213ENST00000482192 K7EQD1 137 aa8.18□□□□□ -1.1
HMGN1-213ENST00000482192 GYPEP15421 78 aa8.18□□□□□ -1.1
HMGN1-213ENST00000482192 PTH2Q96A98 100 aa8.18□□□□□ -1.1
HMGN1-213ENST00000482192 IGKV3D-20A0A0C4DH25 116 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 TRBV6-1A0A0K0K1D8 114 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 SIVA1O15304 175 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 CIDEAO60543 219 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 PAGE4O60829 102 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 NXPH4O95158 308 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 H2AFB1P0C5Y9 115 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 RNASE3P12724 160 aaKnown RBP8.17□□□□□ -1.1
HMGN1-213ENST00000482192 LYPD5Q6UWN5 251 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 COX8CQ7Z4L0 72 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 TCTE3Q8IZS6 198 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 ZC2HC1AQ96GY0 325 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 KRTAP1-5Q9BYS1 174 aa8.17□□□□□ -1.1
HMGN1-213ENST00000482192 A0A1B0GV50 99 aa8.16□□□□□ -1.1
HMGN1-213ENST00000482192 LTAP01374 205 aa8.16□□□□□ -1.1
HMGN1-213ENST00000482192 BTF3P20290 206 aaKnown RBP8.16□□□□□ -1.1
HMGN1-213ENST00000482192 S100A4P26447 101 aaKnown RBP8.16□□□□□ -1.1
HMGN1-213ENST00000482192 ASIPP42127 132 aa8.16□□□□□ -1.1
HMGN1-213ENST00000482192 AKR1C3P42330 323 aa8.16□□□□□ -1.1
HMGN1-213ENST00000482192 LGALSLQ3ZCW2 172 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-213ENST00000482192 ZNF506Q5JVG8 444 aa8.16□□□□□ -1.1
HMGN1-213ENST00000482192 FAM162BQ5T6X4 162 aa8.16□□□□□ -1.1
HMGN1-213ENST00000482192 CFAP126Q5VTH2 177 aa8.16□□□□□ -1.1
HMGN1-213ENST00000482192 EIF5AL1Q6IS14 154 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms