RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 TRAV2A0A0B4J234 112 aa8.88□□□□□ -0.99
SMPD4-218ENST00000482171 CRXO43186 299 aaPredicted RBP8.88□□□□□ -0.99
SMPD4-218ENST00000482171 TNFRSF6BO95407 300 aa8.88□□□□□ -0.99
SMPD4-218ENST00000482171 IGKV1-17P01599 117 aa8.88□□□□□ -0.99
SMPD4-218ENST00000482171 GAGE2BQ13066 116 aa8.88□□□□□ -0.99
SMPD4-218ENST00000482171 GAGE2EQ4V326 116 aa8.88□□□□□ -0.99
SMPD4-218ENST00000482171 THAP8Q8NA92 274 aa8.88□□□□□ -0.99
SMPD4-218ENST00000482171 USMG5Q96IX5 58 aa8.88□□□□□ -0.99
SMPD4-218ENST00000482171 GAGE2DQ9UEU5 116 aa8.88□□□□□ -0.99
SMPD4-218ENST00000482171 IGHV7-81A0A0B4J1V7 117 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 TRAV12-3A0A0B4J271 114 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 TSPAN13O95857 204 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 IGLV2-23P01705 113 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 RBX1P62877 108 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 DEFB112Q30KQ8 113 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 LGALS9BQ3B8N2 356 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 MRPL51Q4U2R6 128 aaKnown RBP8.87□□□□□ -0.99
SMPD4-218ENST00000482171 LGALS9CQ6DKI2 356 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 PATE2Q6UY27 113 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 DTX2Q86UW9 622 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 IGKV3OR2-268A0A0C4DH90 116 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 GEMIN7Q9H840 131 aaKnown RBP8.87□□□□□ -0.99
SMPD4-218ENST00000482171 PEMTQ9UBM1 199 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 RNF114Q9Y508 228 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 K7EIM0 57 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 NPYP01303 97 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 ORMDL2Q53FV1 153 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 ZFAND6Q6FIF0 208 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 C1orf122Q6ZSJ8 110 aa8.87□□□□□ -0.99
SMPD4-218ENST00000482171 C9orf139Q6ZV77 190 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 DAZ1Q9NQZ3 744 aaKnown RBP8.86□□□□□ -0.99
SMPD4-218ENST00000482171 FAM223BA6NKX1 122 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 FAM223AQ8IWN6 122 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 VGLL1Q99990 258 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 DSCAML1Q8TD84 2053 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 K7EMI3 77 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 LYPD1Q8N2G4 141 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 VCX2Q9H322 139 aa8.86□□□□□ -0.99
SMPD4-218ENST00000482171 C2orf70A6NJV1 201 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 OVOL1O14753 267 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 SH2D6Q7Z4S9 175 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 TTTY13Q9BZ97 58 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 PRORYQ9H606 182 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 SCRT2Q9NQ03 307 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 H3BRN7 92 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 J3QKU1 62 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 EIF4EBP1Q13541 118 aaPredicted RBP8.85□□□□□ -0.99
SMPD4-218ENST00000482171 TMEM75Q8N9X5 138 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 GATA3P23771 443 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 C10orf126Q8N4M7 172 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 C10orf105Q8TEF2 133 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 IGF2BP2-AS1Q96M15 143 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 ATP6V0BQ99437 205 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 PLNP26678 52 aa8.85□□□□□ -0.99
SMPD4-218ENST00000482171 NPIPB6E9PJ23 425 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 H7C1H1 209 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 PDE6HQ13956 83 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 Q8N9W7 124 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 MRPL35Q9NZE8 188 aaKnown RBP8.84□□□□□ -0.99
SMPD4-218ENST00000482171 I3L2K1 104 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 PPP1R17O96001 155 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 STHQ8IWL8 128 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 GTSF1Q8WW33 167 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 MRAP2Q96G30 205 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 TEX22C9J3V5 150 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 CTRLP40313 264 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 C8orf86Q6ZUL3 223 aa8.84□□□□□ -0.99
SMPD4-218ENST00000482171 IGHV3-73A0A0B4J1V6 119 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 LINC01549A6NIU2 74 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 F8W1H4 67 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 PAX1P15863 534 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 C14orf178Q8N769 122 aaPredicted RBP8.83□□□□□ -1
SMPD4-218ENST00000482171 LINC01559Q495D7 138 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 LINC01545Q5VT33 79 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 DYNAPQ8N1N2 210 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 FAM167A-AS1Q96KT0 104 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 LTAP01374 205 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 PAPPA-AS1Q5QFB9 102 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 ERG28Q9UKR5 140 aa8.83□□□□□ -1
SMPD4-218ENST00000482171 FLNBO75369 2602 aaKnown RBP8.83□□□□□ -1
SMPD4-218ENST00000482171 PRSS46E5RG02 174 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 F6UB75 175 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 DEFB131AP59861 70 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 MEIG1Q5JSS6 88 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 CELSR3Q9NYQ7 3312 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 EYSQ5T1H1 3165 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 LMO4P61968 165 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 UBE2E2Q96LR5 201 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 TNFRSF18Q9Y5U5 241 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 TRAV26-2A0A0B4J265 109 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 C9JAW5 83 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
SMPD4-218ENST00000482171 GDF5OSQ5U4N7 250 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 PRR25Q96S07 402 aa8.82□□□□□ -1
SMPD4-218ENST00000482171 IGLV11-55A0A075B6I3 123 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 A0A0U1RRA0 63 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 DUSP14O95147 198 aaKnown RBP8.81□□□□□ -1
SMPD4-218ENST00000482171 DEFB136Q30KP8 78 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 ZNF503Q96F45 646 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms