RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 GAGE12GP0CL81 117 aa11.53□□□□□ -0.56
CCDC78-212ENST00000482152 GAGE12IP0CL82 117 aa11.53□□□□□ -0.56
CCDC78-212ENST00000482152 TMEM183BQ1AE95 376 aa11.53□□□□□ -0.56
CCDC78-212ENST00000482152 C8orf49Q96NF6 230 aa11.53□□□□□ -0.56
CCDC78-212ENST00000482152 TRGV2A0A075B6R0 118 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 TRGV1A0A0A0MS02 117 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 A0A1B0GV50 99 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 P0DMU3 169 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 FAM231AP0DMU4 169 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 FAM231CP0DMU5 169 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.57
CCDC78-212ENST00000482152 AKR1C3P42330 323 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 Q6ZTI0 123 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 Q86TA4 180 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 TMEM183AQ8IXX5 376 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 NAGKQ9UJ70 344 aa11.52□□□□□ -0.57
CCDC78-212ENST00000482152 IFNA1P01562 189 aa11.51□□□□□ -0.57
CCDC78-212ENST00000482152 TMEM88Q6PEY1 159 aa11.51□□□□□ -0.57
CCDC78-212ENST00000482152 RASL10AQ92737 203 aa11.51□□□□□ -0.57
CCDC78-212ENST00000482152 LYSTQ99698 3801 aa11.51□□□□□ -0.57
CCDC78-212ENST00000482152 MDFICQ9P1T7 246 aa11.51□□□□□ -0.57
CCDC78-212ENST00000482152 GNG13Q9P2W3 67 aa11.51□□□□□ -0.57
CCDC78-212ENST00000482152 IGHV3-16A0A0C4DH30 117 aa11.5□□□□□ -0.57
CCDC78-212ENST00000482152 H3BNG1 76 aa11.5□□□□□ -0.57
CCDC78-212ENST00000482152 LTAP01374 205 aa11.5□□□□□ -0.57
CCDC78-212ENST00000482152 ZNF80P51504 273 aaPredicted RBP11.5□□□□□ -0.57
CCDC78-212ENST00000482152 BLOC1S1P78537 153 aa11.5□□□□□ -0.57
CCDC78-212ENST00000482152 CCL20P78556 96 aa11.5□□□□□ -0.57
CCDC78-212ENST00000482152 SLAQ13239 276 aa11.5□□□□□ -0.57
CCDC78-212ENST00000482152 PLECQ15149 4684 aaKnown RBP11.49□□□□□ -0.57
CCDC78-212ENST00000482152 GNRH2O43555 120 aa11.49□□□□□ -0.57
CCDC78-212ENST00000482152 M0R2P5 195 aa11.48□□□□□ -0.57
CCDC78-212ENST00000482152 PDE6DO43924 150 aa11.48□□□□□ -0.57
CCDC78-212ENST00000482152 TYMSP04818 313 aa11.48□□□□□ -0.57
CCDC78-212ENST00000482152 FAM162BQ5T6X4 162 aa11.48□□□□□ -0.57
CCDC78-212ENST00000482152 SCO2A0A1W2PP80 73 aa11.47□□□□□ -0.57
CCDC78-212ENST00000482152 OR5I1Q13606 314 aa11.47□□□□□ -0.57
CCDC78-212ENST00000482152 RNF212Q495C1 297 aa11.47□□□□□ -0.57
CCDC78-212ENST00000482152 C11orf52Q96A22 123 aa11.47□□□□□ -0.57
CCDC78-212ENST00000482152 PTH2Q96A98 100 aa11.47□□□□□ -0.57
CCDC78-212ENST00000482152 C11orf21Q9P2W6 132 aa11.47□□□□□ -0.57
CCDC78-212ENST00000482152 VAX2Q9UIW0 290 aa11.47□□□□□ -0.57
CCDC78-212ENST00000482152 CIDEAO60543 219 aa11.46□□□□□ -0.57
CCDC78-212ENST00000482152 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.57
CCDC78-212ENST00000482152 FAM3BP58499 235 aaPredicted RBP11.46□□□□□ -0.57
CCDC78-212ENST00000482152 MEF2BQ02080 365 aaPredicted RBP11.46□□□□□ -0.57
CCDC78-212ENST00000482152 ZNF674Q2M3X9 581 aa11.46□□□□□ -0.57
CCDC78-212ENST00000482152 ALKAL2Q6UX46 152 aa11.46□□□□□ -0.57
CCDC78-212ENST00000482152 BAGE2Q86Y30 109 aa11.46□□□□□ -0.57
CCDC78-212ENST00000482152 POM121L12Q8N7R1 296 aa11.46□□□□□ -0.57
CCDC78-212ENST00000482152 ZC2HC1AQ96GY0 325 aa11.46□□□□□ -0.57
CCDC78-212ENST00000482152 MRPL16Q9NX20 251 aaKnown RBP11.46□□□□□ -0.57
CCDC78-212ENST00000482152 RYR3Q15413 4870 aa11.45□□□□□ -0.58
CCDC78-212ENST00000482152 PIK3CD-AS1Q5SR53 167 aa11.45□□□□□ -0.58
CCDC78-212ENST00000482152 MLST8Q9BVC4 326 aa11.45□□□□□ -0.58
CCDC78-212ENST00000482152 TRAV26-1A0A087WT03 109 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 B4DEV8 164 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 ORM1P02763 201 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 BCL2P10415 239 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 HOXA5P20719 270 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 S100A4P26447 101 aaKnown RBP11.44□□□□□ -0.58
CCDC78-212ENST00000482152 CRIP1P50238 77 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 SMIM12Q96EX1 92 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 RYR2Q92736 4967 aa11.44□□□□□ -0.58
CCDC78-212ENST00000482152 TRAV4A0A0B4J268 109 aa11.43□□□□□ -0.58
CCDC78-212ENST00000482152 IGKV3D-20A0A0C4DH25 116 aa11.43□□□□□ -0.58
CCDC78-212ENST00000482152 SH2D1AO60880 128 aa11.43□□□□□ -0.58
CCDC78-212ENST00000482152 NUDT3O95989 172 aa11.43□□□□□ -0.58
CCDC78-212ENST00000482152 ASIPP42127 132 aa11.43□□□□□ -0.58
CCDC78-212ENST00000482152 RPL35P42766 123 aaKnown RBP11.43□□□□□ -0.58
CCDC78-212ENST00000482152 C9orf85Q96MD7 179 aa11.43□□□□□ -0.58
CCDC78-212ENST00000482152 SACSQ9NZJ4 4579 aa11.43□□□□□ -0.58
CCDC78-212ENST00000482152 KRBOX1C9JBD0 128 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 ZNF876PQ49A33 203 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 OR4C5Q8NGB2 326 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 IL36BQ9NZH7 164 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 HHLA3Q9XRX5 114 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 BOLA1Q9Y3E2 137 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 ALMS1Q8TCU4 4167 aa11.42□□□□□ -0.58
CCDC78-212ENST00000482152 TRGV4A0A0C4DH28 118 aa11.41□□□□□ -0.58
CCDC78-212ENST00000482152 RNASE3P12724 160 aaKnown RBP11.41□□□□□ -0.58
CCDC78-212ENST00000482152 CCL18P55774 89 aa11.41□□□□□ -0.58
CCDC78-212ENST00000482152 FHL2Q14192 279 aa11.41□□□□□ -0.58
CCDC78-212ENST00000482152 BIN3Q9NQY0 253 aa11.41□□□□□ -0.58
CCDC78-212ENST00000482152 PAX4O43316 350 aa11.4□□□□□ -0.58
CCDC78-212ENST00000482152 NDUFS6O75380 124 aaKnown RBP11.4□□□□□ -0.58
CCDC78-212ENST00000482152 CXCL1P09341 107 aa11.4□□□□□ -0.58
CCDC78-212ENST00000482152 MED9Q9NWA0 146 aa11.4□□□□□ -0.58
CCDC78-212ENST00000482152 DNAH1Q9P2D7 4330 aa11.39□□□□□ -0.59
CCDC78-212ENST00000482152 A0A0J9YY99 117 aa11.39□□□□□ -0.59
CCDC78-212ENST00000482152 RBFOX3A6NFN3 312 aa11.39□□□□□ -0.59
CCDC78-212ENST00000482152 IGHV3-53P01767 116 aa11.39□□□□□ -0.59
CCDC78-212ENST00000482152 CRYBA4P53673 196 aa11.39□□□□□ -0.59
CCDC78-212ENST00000482152 VSIG2Q96IQ7 327 aa11.39□□□□□ -0.59
CCDC78-212ENST00000482152 C9JCJ5 164 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms