RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 AP5S1Q9NUS5 200 aa14.89□□□□□ -0.03
CHKB-209ENST00000481673 ZNF688P0C7X2 276 aa14.89□□□□□ -0.03
CHKB-209ENST00000481673 TSPOP30536 169 aa14.89□□□□□ -0.03
CHKB-209ENST00000481673 ASIPP42127 132 aa14.89□□□□□ -0.03
CHKB-209ENST00000481673 SSTP61278 116 aa14.89□□□□□ -0.03
CHKB-209ENST00000481673 MUC21A0A0G2JKD1 596 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 MUC21A0A140T8X8 626 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 S100A4P26447 101 aaKnown RBP14.88□□□□□ -0.03
CHKB-209ENST00000481673 TFPI2P48307 235 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 MUC21Q5SSG8 566 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 SPANXN1Q5VSR9 72 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 TEX43Q6ZNM6 134 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 FA2HQ7L5A8 372 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 ZNF664Q8N3J9 261 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 JMJD8Q96S16 334 aa14.88□□□□□ -0.03
CHKB-209ENST00000481673 FOXI2Q6ZQN5 318 aa14.87□□□□□ -0.03
CHKB-209ENST00000481673 MSRB1Q9NZV6 116 aa14.87□□□□□ -0.03
CHKB-209ENST00000481673 C3orf79P0CE67 100 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 HILS1P60008 231 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 DEFB1P60022 68 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 DEFB136Q30KP8 78 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 PRR31Q5SQ13 230 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 C18orf65Q6ZTR6 163 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 IGHV1-24A0A0C4DH33 117 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 CD33P20138 364 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 BTF3P20290 206 aaKnown RBP14.86□□□□□ -0.03
CHKB-209ENST00000481673 ADAMTSL5Q6ZMM2 481 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 RNF185Q96GF1 192 aa14.86□□□□□ -0.03
CHKB-209ENST00000481673 LINC00587B1AMM8 73 aa14.85□□□□□ -0.03
CHKB-209ENST00000481673 J3KRW8 73 aa14.85□□□□□ -0.03
CHKB-209ENST00000481673 TCF21O43680 179 aa14.85□□□□□ -0.03
CHKB-209ENST00000481673 LEPROTL1O95214 131 aa14.85□□□□□ -0.03
CHKB-209ENST00000481673 PMCHL1Q16048 86 aa14.85□□□□□ -0.03
CHKB-209ENST00000481673 ANXA2RQ3ZCQ2 193 aa14.85□□□□□ -0.03
CHKB-209ENST00000481673 OR10AG1Q8NH19 301 aa14.85□□□□□ -0.03
CHKB-209ENST00000481673 HSPB8Q9UJY1 196 aa14.85□□□□□ -0.03
CHKB-209ENST00000481673 SONP18583 2426 aaKnown RBP14.85□□□□□ -0.03
CHKB-209ENST00000481673 CSN3P07498 182 aa14.84□□□□□ -0.03
CHKB-209ENST00000481673 FAM159AQ6UWV7 190 aa14.84□□□□□ -0.03
CHKB-209ENST00000481673 DLX4Q92988 240 aaPredicted RBP14.84□□□□□ -0.03
CHKB-209ENST00000481673 SCRT2Q9NQ03 307 aa14.84□□□□□ -0.03
CHKB-209ENST00000481673 GCN1Q92616 2671 aaKnown RBP14.84□□□□□ -0.03
CHKB-209ENST00000481673 H3BVH4 76 aa14.84□□□□□ -0.03
CHKB-209ENST00000481673 TMEM70Q9BUB7 260 aa14.84□□□□□ -0.03
CHKB-209ENST00000481673 TSSC4Q9Y5U2 329 aaPredicted RBP14.84□□□□□ -0.03
CHKB-209ENST00000481673 SELENOKQ9Y6D0 94 aa14.84□□□□□ -0.03
CHKB-209ENST00000481673 ZNF469Q96JG9 3925 aaPredicted RBP14.83□□□□□ -0.03
CHKB-209ENST00000481673 C7orf71A4D174 169 aa14.83□□□□□ -0.04
CHKB-209ENST00000481673 CRXO43186 299 aaPredicted RBP14.83□□□□□ -0.04
CHKB-209ENST00000481673 TDRG1Q3Y452 100 aa14.83□□□□□ -0.04
CHKB-209ENST00000481673 LINC01006Q8NI28 216 aa14.83□□□□□ -0.04
CHKB-209ENST00000481673 PHLDA3Q9Y5J5 127 aa14.83□□□□□ -0.04
CHKB-209ENST00000481673 NDUFA7O95182 113 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 DDTP30046 118 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 CDKN1BP46527 198 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 FHL3Q13643 280 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 Q6ZQT7 251 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 DYNLRB2Q8TF09 96 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 MAP1LC3AQ9H492 121 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 SIGLEC8Q9NYZ4 499 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 TRAV25A0A0B4J276 109 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 Q8N976 141 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 VAMP8Q9BV40 100 aa14.82□□□□□ -0.04
CHKB-209ENST00000481673 IFI27P40305 119 aaPredicted RBP14.81□□□□□ -0.04
CHKB-209ENST00000481673 PRO1933Q9H354 126 aa14.81□□□□□ -0.04
CHKB-209ENST00000481673 NXT2Q9NPJ8 142 aaKnown RBP14.81□□□□□ -0.04
CHKB-209ENST00000481673 RNF114Q9Y508 228 aa14.81□□□□□ -0.04
CHKB-209ENST00000481673 KIR2DL5BA0A0G2JN68 375 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 KIR2DL5BA0A0G2JPC4 375 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 EVI2AP22794 236 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 KIR2DL5AQ8N109 375 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 DEFB125Q8N687 156 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 MRAP2Q96G30 205 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 C20orf202A1L168 122 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 DEFB114Q30KQ6 69 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 RAX2Q96IS3 184 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 SPAG8Q99932 426 aaPredicted RBP14.8□□□□□ -0.04
CHKB-209ENST00000481673 C20orf144Q9BQM9 153 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 MAP1LC3CQ9BXW4 147 aa14.8□□□□□ -0.04
CHKB-209ENST00000481673 OR4C46A6NHA9 309 aa14.79□□□□□ -0.04
CHKB-209ENST00000481673 PRSS47A8MTI9 375 aa14.79□□□□□ -0.04
CHKB-209ENST00000481673 CCL24O00175 119 aa14.79□□□□□ -0.04
CHKB-209ENST00000481673 NPYP01303 97 aa14.79□□□□□ -0.04
CHKB-209ENST00000481673 LINC01546A6NGU7 62 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 A8MTW9 85 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 TNFRSF6BO95407 300 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 DEFA6Q01524 100 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 KIR3DS1Q14943 382 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 LOC389332A0A1B0GUA5 103 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 NXPH4O95158 308 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 CD28P10747 220 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 RNASE3P12724 160 aaKnown RBP14.78□□□□□ -0.04
CHKB-209ENST00000481673 PET117Q6UWS5 81 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 TMEM61Q8N0U2 210 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 DUX3Q96PT4 197 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 DPH3P1Q9H4G8 78 aa14.78□□□□□ -0.04
CHKB-209ENST00000481673 ACANP16112 2415 aa14.77□□□□□ -0.04
CHKB-209ENST00000481673 TRAV12-3A0A0B4J271 114 aa14.77□□□□□ -0.05
CHKB-209ENST00000481673 SYS1-DBNDD2H3BUS1 97 aa14.77□□□□□ -0.05
CHKB-209ENST00000481673 GNRH2O43555 120 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms