RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 MAP1LC3BQ9GZQ8 125 aa0.43□□□□□ -2.34
CALD1-219ENST00000480638 C6orf62Q9GZU0 229 aaPredicted RBP0.43□□□□□ -2.34
CALD1-219ENST00000480638 TAF9BQ9HBM6 251 aa0.43□□□□□ -2.34
CALD1-219ENST00000480638 C14orf132Q9NPU4 83 aa0.43□□□□□ -2.34
CALD1-219ENST00000480638 CD109Q6YHK3 1445 aa0.43□□□□□ -2.34
CALD1-219ENST00000480638 TRAPPC8Q9Y2L5 1435 aa0.43□□□□□ -2.34
CALD1-219ENST00000480638 ROCK1Q13464 1354 aa0.43□□□□□ -2.34
CALD1-219ENST00000480638 DNAH3Q8TD57 4116 aa0.43□□□□□ -2.34
CALD1-219ENST00000480638 CEP192Q8TEP8 1941 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 KIF14Q15058 1648 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 ABCA6Q8N139 1617 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 PLCE1Q9P212 2302 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 PKD1L3Q7Z443 1732 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 PEAK1Q9H792 1746 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 MAST1Q9Y2H9 1570 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 TECPR2O15040 1411 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 TRDV1A0A1B0GX56 115 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 CCDC160A6NGH7 325 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 ZNF736B4DX44 427 aaPredicted RBP0.42□□□□□ -2.34
CALD1-219ENST00000480638 H0YJX3 145 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 PROSCO94903 275 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 RPL7P18124 248 aaKnown RBP0.42□□□□□ -2.34
CALD1-219ENST00000480638 ASIPP42127 132 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 RTL8BQ17RB0 113 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 SPRNQ5BIV9 151 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 EIF5AL1Q6IS14 154 aaKnown RBP0.42□□□□□ -2.34
CALD1-219ENST00000480638 DCUN1D2Q6PH85 259 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 TEX261Q6UWH6 196 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 TMEM14EPQ6UXP3 125 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 ZNF833PQ6ZTB9 187 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 PHF5AQ7RTV0 110 aaKnown RBP0.42□□□□□ -2.34
CALD1-219ENST00000480638 PRR15Q8IV56 129 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 ST6GALNAC3Q8NDV1 305 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 PPTC7Q8NI37 304 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 DYDC1Q8WWB3 177 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 PATE1Q8WXA2 126 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 POP5Q969H6 163 aaKnown RBP0.42□□□□□ -2.34
CALD1-219ENST00000480638 CHCHD1Q96BP2 118 aaKnown RBP0.42□□□□□ -2.34
CALD1-219ENST00000480638 MALSU1Q96EH3 234 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 GPER1Q99527 375 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 SELENOSQ9BQE4 189 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 RTL8AQ9BWD3 113 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 CACYBPQ9HB71 228 aaKnown RBP0.42□□□□□ -2.34
CALD1-219ENST00000480638 LRTM1Q9HBL6 345 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 TAS2R7Q9NYW3 318 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 MED11Q9P086 117 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 U3KQ87 197 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 ECM29Q5VYK3 1845 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 PBRM1Q86U86 1689 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 ITSN2Q9NZM3 1697 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 MUC17Q685J3 4493 aa0.42□□□□□ -2.34
CALD1-219ENST00000480638 GOLGA3Q08378 1498 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 MAGI1Q96QZ7 1491 aaPredicted RBP0.41□□□□□ -2.34
CALD1-219ENST00000480638 IFT140Q96RY7 1462 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 WNK2Q9Y3S1 2297 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 SUPT6HQ7KZ85 1726 aaKnown RBP0.41□□□□□ -2.34
CALD1-219ENST00000480638 TNXBP22105 4242 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 KIF1BO60333 1816 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 ZNF142P52746 1687 aaPredicted RBP0.41□□□□□ -2.34
CALD1-219ENST00000480638 VPS13DQ5THJ4 4388 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 A0A087WSZ3 146 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 TRAV10A0A0B4J240 114 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 TRAV5A0A0B4J249 113 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 TCRBV4S1A1TA0A5B7 111 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 E7EUB6 86 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 GABARAPH6UMI1 98 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 RER1O15258 196 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 CCL25O15444 150 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 CCL16O15467 120 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 IFNA21P01568 189 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 IFNA14P01570 189 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 APOA2P02652 100 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 CD2P06729 351 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 ZNF25P17030 456 aaPredicted RBP0.41□□□□□ -2.34
CALD1-219ENST00000480638 RPS3P23396 243 aaKnown RBP eCLIP0.41□□□□□ -2.34
CALD1-219ENST00000480638 DSCR4P56555 118 aaPredicted RBP0.41□□□□□ -2.34
CALD1-219ENST00000480638 HBBP68871 147 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 KLRD1Q13241 179 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 EIF3IQ13347 325 aaKnown RBP0.41□□□□□ -2.34
CALD1-219ENST00000480638 SPATA8Q6RVD6 105 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 ANGPTL5Q86XS5 388 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 OR5D16Q8NGK9 328 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 OR5D14Q8NGL3 314 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 OR4K15Q8NH41 348 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 TEX47Q8TBZ9 253 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 THEM6Q8WUY1 208 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 RAB37Q96AX2 223 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 BORCS8Q96FH0 119 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 ZNF714Q96N38 554 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 LINC00467Q9BRT7 94 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 DDA1Q9BW61 102 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 OR2H1Q9GZK4 316 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 CENPHQ9H3R5 247 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 MRPL40Q9NQ50 206 aaKnown RBP0.41□□□□□ -2.34
CALD1-219ENST00000480638 NIT2Q9NQR4 276 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 CDC42SE1Q9NRR8 79 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 RASL12Q9NYN1 266 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 NAT8BQ9UHF3 227 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 ATPIF1Q9UII2 106 aa0.41□□□□□ -2.34
CALD1-219ENST00000480638 NDUFAF1Q9Y375 327 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms