RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 AMN1Q8IY45 258 aa14.68□□□□□ -0.06
TNFRSF8-204ENST00000479933 RNF182Q8N6D2 247 aa14.68□□□□□ -0.06
TNFRSF8-204ENST00000479933 IGHV3-66A0A0C4DH42 116 aa14.68□□□□□ -0.06
TNFRSF8-204ENST00000479933 GCSHP23434 173 aa14.68□□□□□ -0.06
TNFRSF8-204ENST00000479933 ATP5J2P56134 94 aa14.68□□□□□ -0.06
TNFRSF8-204ENST00000479933 PRO0461Q9UI25 63 aa14.68□□□□□ -0.06
TNFRSF8-204ENST00000479933 TIMM8BQ9Y5J9 83 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF8-204ENST00000479933 MRPL51Q4U2R6 128 aaKnown RBP14.67□□□□□ -0.06
TNFRSF8-204ENST00000479933 TMEM78Q5T7P6 136 aa14.67□□□□□ -0.06
TNFRSF8-204ENST00000479933 C8orf86Q6ZUL3 223 aa14.67□□□□□ -0.06
TNFRSF8-204ENST00000479933 ATP6V0E2Q8NHE4 81 aa14.67□□□□□ -0.06
TNFRSF8-204ENST00000479933 CHAC1Q9BUX1 264 aa14.67□□□□□ -0.06
TNFRSF8-204ENST00000479933 ITPR1Q14643 2758 aa14.67□□□□□ -0.06
TNFRSF8-204ENST00000479933 TRAV8-2A0A0B4J237 113 aa14.66□□□□□ -0.06
TNFRSF8-204ENST00000479933 HBDP02042 147 aa14.66□□□□□ -0.06
TNFRSF8-204ENST00000479933 ARL3P36405 182 aa14.66□□□□□ -0.06
TNFRSF8-204ENST00000479933 NMUP48645 174 aa14.66□□□□□ -0.06
TNFRSF8-204ENST00000479933 USMG5Q96IX5 58 aa14.66□□□□□ -0.06
TNFRSF8-204ENST00000479933 IGLL5B9A064 214 aa14.66□□□□□ -0.06
TNFRSF8-204ENST00000479933 AGPAT4-IT1Q9H0P7 198 aa14.66□□□□□ -0.06
TNFRSF8-204ENST00000479933 CYSLTR1Q9Y271 337 aa14.66□□□□□ -0.06
TNFRSF8-204ENST00000479933 CKS2P33552 79 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 IFI27P40305 119 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 TAL2Q16559 108 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 ETDBQ3ZM63 59 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 C9orf47Q6ZRZ4 202 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 IL17RELQ6ZVW7 336 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 ABCA2Q9BZC7 2435 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 A6NDX4 124 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 NDUFA4O00483 81 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 IGHG2P01859 326 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 MSMBP08118 114 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 C9orf139Q6ZV77 190 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 CEND1Q8N111 149 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 IFI27L1Q96BM0 104 aa14.65□□□□□ -0.06
TNFRSF8-204ENST00000479933 IGHV3OR16-13A0A075B7E8 117 aa14.64□□□□□ -0.07
TNFRSF8-204ENST00000479933 IGHV3-74A0A0B4J1X5 117 aa14.64□□□□□ -0.07
TNFRSF8-204ENST00000479933 IGHV4-38-2P0DP08 117 aa14.64□□□□□ -0.07
TNFRSF8-204ENST00000479933 GAGE13Q4V321 117 aa14.64□□□□□ -0.07
TNFRSF8-204ENST00000479933 ZNF575Q86XF7 245 aa14.64□□□□□ -0.07
TNFRSF8-204ENST00000479933 GLMPQ8WWB7 406 aa14.64□□□□□ -0.07
TNFRSF8-204ENST00000479933 PSMG3-AS1Q96PY0 264 aa14.64□□□□□ -0.07
TNFRSF8-204ENST00000479933 ZMAT4Q9H898 229 aa14.64□□□□□ -0.07
TNFRSF8-204ENST00000479933 ZNF479Q96JC4 524 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 PGPEP1Q9NXJ5 209 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 IGHV3-49A0A0A0MS15 119 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 K7ERJ3 54 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 DSCR9P59020 149 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 LOXL1Q08397 574 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 SH2D6Q7Z4S9 175 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 C16orf92Q96LL3 132 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 LINC00527Q9UJ94 153 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 ERG28Q9UKR5 140 aa14.63□□□□□ -0.07
TNFRSF8-204ENST00000479933 IGHV4-30-2A0A087WSY4 118 aa14.62□□□□□ -0.07
TNFRSF8-204ENST00000479933 FAM106AQ4KMX7 169 aa14.62□□□□□ -0.07
TNFRSF8-204ENST00000479933 LENEPQ9Y5L5 61 aa14.62□□□□□ -0.07
TNFRSF8-204ENST00000479933 LOC389332A0A1B0GUA5 103 aa14.62□□□□□ -0.07
TNFRSF8-204ENST00000479933 H3BUX3 64 aa14.62□□□□□ -0.07
TNFRSF8-204ENST00000479933 PPIFP30405 207 aaKnown RBP14.62□□□□□ -0.07
TNFRSF8-204ENST00000479933 TM4SF20Q53R12 229 aa14.62□□□□□ -0.07
TNFRSF8-204ENST00000479933 CDIP1Q9H305 208 aa14.62□□□□□ -0.07
TNFRSF8-204ENST00000479933 AKAP6Q13023 2319 aa14.61□□□□□ -0.07
TNFRSF8-204ENST00000479933 NHP2Q9NX24 153 aaKnown RBP14.61□□□□□ -0.07
TNFRSF8-204ENST00000479933 LY6EQ16553 131 aa14.6□□□□□ -0.07
TNFRSF8-204ENST00000479933 B4DSR2 109 aa14.6□□□□□ -0.07
TNFRSF8-204ENST00000479933 GATA3P23771 443 aa14.6□□□□□ -0.07
TNFRSF8-204ENST00000479933 C1QTNF4Q9BXJ3 329 aa14.6□□□□□ -0.07
TNFRSF8-204ENST00000479933 H3BMG7 143 aa14.59□□□□□ -0.07
TNFRSF8-204ENST00000479933 NPYP01303 97 aa14.59□□□□□ -0.07
TNFRSF8-204ENST00000479933 MAP1LC3AQ9H492 121 aa14.59□□□□□ -0.07
TNFRSF8-204ENST00000479933 TRBV25-1A0A075B6N4 114 aa14.59□□□□□ -0.07
TNFRSF8-204ENST00000479933 SPINK8P0C7L1 97 aa14.59□□□□□ -0.07
TNFRSF8-204ENST00000479933 EVI2AP22794 236 aa14.59□□□□□ -0.07
TNFRSF8-204ENST00000479933 RNF185Q96GF1 192 aa14.59□□□□□ -0.07
TNFRSF8-204ENST00000479933 IGKV3D-20A0A0C4DH25 116 aa14.58□□□□□ -0.08
TNFRSF8-204ENST00000479933 LINC01546A6NGU7 62 aa14.58□□□□□ -0.08
TNFRSF8-204ENST00000479933 FOXI1Q12951 378 aa14.58□□□□□ -0.08
TNFRSF8-204ENST00000479933 HHLA3Q9XRX5 114 aa14.58□□□□□ -0.08
TNFRSF8-204ENST00000479933 A0A1B0GWB2 263 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 OVOL1O14753 267 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 RRN3P1Q2M238 152 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 LINC00477Q96M19 166 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 MSRB1Q9NZV6 116 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 ZNF580Q9UK33 172 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 PKD1L2Q7Z442 2459 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 CACNA1BQ00975 2339 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 APOMO95445 188 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 PF4V1P10720 104 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 INSL3P51460 131 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 C12orf74Q32Q52 190 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 NXT2Q9NPJ8 142 aaKnown RBP14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 DKK2Q9UBU2 259 aa14.57□□□□□ -0.08
TNFRSF8-204ENST00000479933 IGKV2D-26A0A0A0MRZ7 120 aa14.56□□□□□ -0.08
TNFRSF8-204ENST00000479933 SMKR1H3BMG3 65 aa14.56□□□□□ -0.08
TNFRSF8-204ENST00000479933 UNQ9165/PRO28630Q6UXU0 137 aa14.56□□□□□ -0.08
TNFRSF8-204ENST00000479933 C20orf78Q9BR46 151 aa14.56□□□□□ -0.08
TNFRSF8-204ENST00000479933 VCX2Q9H322 139 aa14.56□□□□□ -0.08
TNFRSF8-204ENST00000479933 C11orf21Q9P2W6 132 aa14.56□□□□□ -0.08
TNFRSF8-204ENST00000479933 LINC01619G3V211 115 aa14.56□□□□□ -0.08
TNFRSF8-204ENST00000479933 IGLV1-40P01703 118 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms