RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 IGHV3-72A0A0B4J1Y9 119 aa8.58□□□□□ -1.04
GSDMB-209ENST00000479136 HOXA3O43365 443 aaPredicted RBP8.58□□□□□ -1.04
GSDMB-209ENST00000479136 DEFA4P12838 97 aa8.58□□□□□ -1.04
GSDMB-209ENST00000479136 SLC25A16P16260 332 aa8.58□□□□□ -1.04
GSDMB-209ENST00000479136 ZNF137PP52743 207 aa8.58□□□□□ -1.04
GSDMB-209ENST00000479136 DEFB113Q30KQ7 82 aa8.58□□□□□ -1.04
GSDMB-209ENST00000479136 KLF17Q5JT82 389 aaPredicted RBP8.58□□□□□ -1.04
GSDMB-209ENST00000479136 PDPNQ86YL7 162 aa8.58□□□□□ -1.04
GSDMB-209ENST00000479136 DPH3Q96FX2 82 aa8.58□□□□□ -1.04
GSDMB-209ENST00000479136 TMEM86BQ8N661 226 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 MLST8Q9BVC4 326 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 SIRPDQ9H106 197 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 JPT2Q9H910 190 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 TMEM167BQ9NRX6 74 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 DPM3Q9P2X0 92 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 LRRK2Q5S007 2527 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 NBR2O15453 112 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 P0C879 139 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 HOXB4P17483 251 aaPredicted RBP8.57□□□□□ -1.04
GSDMB-209ENST00000479136 C3orf56Q8N813 242 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 ZNF414Q96IQ9 312 aa8.57□□□□□ -1.04
GSDMB-209ENST00000479136 TRAV2A0A0B4J234 112 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 IGHV1-3A0A0C4DH29 117 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 FAM240AA0A1B0GVK7 77 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 SPINK9Q5DT21 86 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 FOXA2Q9Y261 457 aaPredicted RBP8.56□□□□□ -1.04
GSDMB-209ENST00000479136 UTP20O75691 2785 aaKnown RBP8.56□□□□□ -1.04
GSDMB-209ENST00000479136 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 PSMB2P49721 201 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
GSDMB-209ENST00000479136 LINC01559Q495D7 138 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 CT83Q5H943 113 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 HCP5Q6MZN7 132 aa8.56□□□□□ -1.04
GSDMB-209ENST00000479136 TRAV3A0A0B4J244 114 aa8.55□□□□□ -1.04
GSDMB-209ENST00000479136 TRAV8-4A0A0B4J246 113 aa8.55□□□□□ -1.04
GSDMB-209ENST00000479136 NPYP01303 97 aa8.55□□□□□ -1.04
GSDMB-209ENST00000479136 LTAP01374 205 aa8.55□□□□□ -1.04
GSDMB-209ENST00000479136 SAA1P0DJI8 122 aaPredicted RBP8.55□□□□□ -1.04
GSDMB-209ENST00000479136 RPL35AP18077 110 aaKnown RBP8.55□□□□□ -1.04
GSDMB-209ENST00000479136 RPL13AP40429 203 aaKnown RBP8.55□□□□□ -1.04
GSDMB-209ENST00000479136 ZMAT4Q9H898 229 aa8.55□□□□□ -1.04
GSDMB-209ENST00000479136 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
GSDMB-209ENST00000479136 ODF3BA8MYP8 253 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 LY6LH3BQJ8 138 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 MSMBP08118 114 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 CD7P09564 240 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 CACNG7P62955 275 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 VMA21Q3ZAQ7 101 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 GFRA4Q9GZZ7 299 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 ARHGAP32A7KAX9 2087 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 RBAKDNA6NC62 111 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 B4DSR2 109 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 OVOL1O14753 267 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 TIMM23O14925 209 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 HLA-DMBP28068 263 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 UBE2E1P51965 193 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
GSDMB-209ENST00000479136 TRAV8-1A0A0A6YYK1 113 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 FAM236AA0A1B0GUQ0 79 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 FAM236BA0A1B0GV22 79 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 C15orf61A6NNL5 157 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 RNF223E7ERA6 249 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 UPK2O00526 184 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 COX7CP15954 63 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 PAX8Q06710 450 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 MINOS1Q5TGZ0 78 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 MAPK1IP1LQ8NDC0 245 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 ZNF355PQ9NSJ1 428 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 MINOS1-NBL1R4GNA1 71 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 TRBV7-3A0A075B6L6 115 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 IGHV3OR16-10A0A075B7F0 116 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 APOHP02749 345 aaPredicted RBP8.53□□□□□ -1.04
GSDMB-209ENST00000479136 EBI3Q14213 229 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 OR8A1Q8NGG7 326 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 C7orf69Q9H7B7 122 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 EPDR1Q9UM22 224 aa8.53□□□□□ -1.04
GSDMB-209ENST00000479136 HAX1O00165 279 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 LGALS1P09382 135 aaKnown RBP8.52□□□□□ -1.05
GSDMB-209ENST00000479136 PLGLAQ15195 96 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 AMN1Q8IY45 258 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 C20orf173Q96LM9 149 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 TRGV9Q99603 122 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 TRACP01848 142 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 CD24P25063 80 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 LINC01356Q8N9X3 169 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 Q96MF0 132 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 HIST1H4GQ99525 98 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 PLEKHA3Q9HB20 300 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 TMEM14BQ9NUH8 114 aa8.52□□□□□ -1.05
GSDMB-209ENST00000479136 SPG11Q96JI7 2443 aa8.51□□□□□ -1.05
GSDMB-209ENST00000479136 ACTL6BO94805 426 aa8.51□□□□□ -1.05
GSDMB-209ENST00000479136 SAA4P35542 130 aa8.51□□□□□ -1.05
GSDMB-209ENST00000479136 ZNF493Q6ZR52 646 aa8.51□□□□□ -1.05
GSDMB-209ENST00000479136 IFI27L1Q96BM0 104 aa8.51□□□□□ -1.05
GSDMB-209ENST00000479136 HHLA3Q9XRX5 114 aa8.51□□□□□ -1.05
GSDMB-209ENST00000479136 CRYBG3Q68DQ2 2970 aa8.51□□□□□ -1.05
GSDMB-209ENST00000479136 TRAV40A0A0B4J280 105 aa8.5□□□□□ -1.05
GSDMB-209ENST00000479136 IGLV2-23P01705 113 aa8.5□□□□□ -1.05
GSDMB-209ENST00000479136 GOLT1AQ6ZVE7 132 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms