RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 LAMTOR2Q9Y2Q5 125 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 CPDO75976 1380 aa-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.1□□□□□ -2.43
SYCP3-205ENST00000478238 JMJD1CQ15652 2540 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 CHD9Q3L8U1 2897 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 CASZ1Q86V15 1759 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 PLXNA1Q9UIW2 1896 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 CACNA1CQ13936 2221 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 A0A096LNT2 108 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 A0A1W2PRE2 83 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 IFITM5A6NNB3 132 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 TFF1P04155 84 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 CCKP06307 115 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 BLCAPP62952 87 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 KLKP1Q107X0 134 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 RHOHQ15669 191 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 CCSMST1Q4G0I0 132 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 TMEM78Q5T7P6 136 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 IDO2Q6ZQW0 420 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 STX12Q86Y82 276 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 OR5A2Q8NGI9 324 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 BRK1Q8WUW1 75 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 DMAC1Q96GE9 116 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 SMIM7Q9BQ49 75 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 LXNQ9BS40 222 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 CCDC32Q9BV29 185 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 C19orf12Q9NSK7 152 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 CBLN4Q9NTU7 201 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 TMEM14BQ9NUH8 114 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 MED31Q9Y3C7 131 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 AKAP11Q9UKA4 1901 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 F5P12259 2224 aa-0.11□□□□□ -2.43
SYCP3-205ENST00000478238 WDR97A6NE52 1622 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 AHCTF1Q8WYP5 2266 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 VIRMAQ69YN4 1812 aaKnown RBP-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 IGHV1-24A0A0C4DH33 117 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 TRBV7-6A0A0J9YX20 115 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 LOC107984640A0A0U1RRK4 108 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 RPL7P18124 248 aaKnown RBP-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 CKS2P33552 79 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 ETV6P41212 452 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 PPP1R2P3Q6NXS1 205 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 UNQ5815/PRO19632Q6UWF5 114 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 OTOSQ8NHW6 89 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 THEM6Q8WUY1 208 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 ATG5Q9H1Y0 275 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 BOLA2Q9H3K6 86 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 PBRM1Q86U86 1689 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 ABCA4P78363 2273 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 F8P00451 2351 aa-0.12□□□□□ -2.43
SYCP3-205ENST00000478238 BLMP54132 1417 aaPredicted RBP-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 PARP14Q460N5 1801 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 ARFGEF1Q9Y6D6 1849 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 ASXL3Q9C0F0 2248 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 MUC12Q9UKN1 5478 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 WNK2Q9Y3S1 2297 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 KDM5CP41229 1560 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 A2MP01023 1474 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 TRAV17A0A0B4J275 112 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 E5RI56 91 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 HBDP02042 147 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 ADCYAP1P18509 176 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 SRP9P49458 86 aaKnown RBP-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 POLR2HP52434 150 aaKnown RBP-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 PCBD1P61457 104 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 DSCR8Q96T75 97 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 PRR15LQ9BU68 103 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 PCBD2Q9H0N5 130 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 HIVEP3Q5T1R4 2406 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 MYO7AQ13402 2215 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 MYH13Q9UKX3 1938 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 HMCN2Q8NDA2 5059 aa-0.13□□□□□ -2.43
SYCP3-205ENST00000478238 DOCK11Q5JSL3 2073 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 ZNF142P52746 1687 aaPredicted RBP-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 ROCK1Q13464 1354 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 PHIPQ8WWQ0 1821 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 C9JAW5 83 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 E7EQ34 232 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 PFDN1O60925 122 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 FAM107AO95990 144 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 TCRAP04437 139 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 SLC25A5P05141 298 aaKnown RBP-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 PYYP10082 97 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 POLR2JP52435 117 aaKnown RBP-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 LSM3P62310 102 aaKnown RBP-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 COX6A2Q02221 97 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 Q5XG85 94 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 OR4S1Q8NGB4 309 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 FAM213BQ8TBF2 198 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 NAT14Q8WUY8 206 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 TMEM141Q96I45 108 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 ATPIF1Q9UII2 106 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 U3KQA8 63 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 MYH9P35579 1960 aaKnown RBP-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 SOGA1O94964 1423 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 PTPRGP23470 1445 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 SPAG17Q6Q759 2223 aa-0.14□□□□□ -2.43
SYCP3-205ENST00000478238 UNC13BO14795 1591 aa-0.15□□□□□ -2.43
SYCP3-205ENST00000478238 LAMC3Q9Y6N6 1575 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms