RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ZNF492Q9P255 531 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 IGKCP01834 107 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 Q1RN00 199 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 RNF5Q99942 180 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 AGPAT4-IT1Q9H0P7 198 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 JPT2Q9H910 190 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 TRAV12-2A0A075B6T6 113 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 CRYGBP07316 175 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 CTSGP08311 255 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 KLHL30-AS1Q8NEE0 82 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 NRGNQ92686 78 aa7.57□□□□□ -1.2
CMC1-209ENST00000477739 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
CMC1-209ENST00000477739 GNRH2O43555 120 aa7.56□□□□□ -1.2
CMC1-209ENST00000477739 RNASE13Q5GAN3 156 aaKnown RBP7.56□□□□□ -1.2
CMC1-209ENST00000477739 LINC01545Q5VT33 79 aa7.56□□□□□ -1.2
CMC1-209ENST00000477739 A0A1B0GWB2 263 aa7.56□□□□□ -1.2
CMC1-209ENST00000477739 IGHV3OR16-12A0A075B7B8 117 aa7.56□□□□□ -1.2
CMC1-209ENST00000477739 MRPL16Q9NX20 251 aaKnown RBP7.56□□□□□ -1.2
CMC1-209ENST00000477739 ADARB2-AS1A8MUL3 147 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 NPIPB6E9PJ23 425 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 WFDC2Q14508 124 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 C1orf122Q6ZSJ8 110 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 A0A096LNJ9 63 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 OR11H12B2RN74 326 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 PSMB2P49721 201 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 ADAMTSL5Q6ZMM2 481 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 OR11H1Q8NG94 326 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 OR11H2Q8NH07 326 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 SRSF8Q9BRL6 282 aaKnown RBP7.55□□□□□ -1.2
CMC1-209ENST00000477739 M0R1W7 72 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 PRSS2P07478 247 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 ZNF688P0C7X2 276 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 ZNF479Q96JC4 524 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 CELSR2Q9HCU4 2923 aa7.55□□□□□ -1.2
CMC1-209ENST00000477739 IGHV7-81A0A0B4J1V7 117 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 TRAV12-3A0A0B4J271 114 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 DPM2O94777 84 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 EDN2P20800 178 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 FBXL19-AS1Q494R0 122 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 ZNF562Q6V9R5 426 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 OR11H6Q8NGC7 330 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 C11orf21Q9P2W6 132 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 HSD52Q0P140 79 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 MS4A6AQ9H2W1 248 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 FBN2P35556 2912 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 ZFHX3Q15911 3703 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 KNCNA6PVL3 124 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 ATP5G2Q06055 141 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 UNQ9165/PRO28630Q6UXU0 137 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 GFRA4Q9GZZ7 299 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 SMAD5-AS1Q9Y6J3 95 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 CHD6Q8TD26 2715 aa7.54□□□□□ -1.2
CMC1-209ENST00000477739 TRBV25-1A0A075B6N4 114 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 LY6LH3BQJ8 138 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 PRM2P04554 102 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 ZNF56Q15929 161 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 CT83Q5H943 113 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 MAPKAPK5-AS1Q8N8E1 139 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.53□□□□□ -1.2
CMC1-209ENST00000477739 CD7P09564 240 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 HLA-DRB4P13762 266 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 RAX2Q96IS3 184 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 TSSC4Q9Y5U2 329 aaPredicted RBP7.53□□□□□ -1.2
CMC1-209ENST00000477739 HLA-DRB4X5D2U9 266 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 NF1P21359 2839 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 ZNF815PA8K554 130 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 OVOL3O00110 214 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 LY6G5BQ8NDX9 201 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 OR10J6PQ8NGY7 276 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 PTH2Q96A98 100 aa7.53□□□□□ -1.2
CMC1-209ENST00000477739 BLCAPP62952 87 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 TTC9CQ8N5M4 171 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
CMC1-209ENST00000477739 TMEM14CQ9P0S9 112 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 KLK9Q9UKQ9 250 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 IGLV11-55A0A075B6I3 123 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 A0A1W2PPM0 123 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 CDKN1BP46527 198 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 SEC11AP67812 179 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 SMIM12Q96EX1 92 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 FLNBO75369 2602 aaKnown RBP7.52□□□□□ -1.21
CMC1-209ENST00000477739 FGF6P10767 208 aa7.52□□□□□ -1.21
CMC1-209ENST00000477739 H3BUX3 64 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 SLC25A16P16260 332 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 GNLYP22749 145 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 RPL39P62891 51 aaKnown RBP7.51□□□□□ -1.21
CMC1-209ENST00000477739 DUX3Q96PT4 197 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 A0A1W2PPR1 153 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 INSL3P51460 131 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 PAX8Q06710 450 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 LAGE3Q14657 143 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 ANXA2RQ3ZCQ2 193 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 PGPEP1Q9NXJ5 209 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 NBEAL2Q6ZNJ1 2754 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 Q6AWC8 147 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 NPBQ8NG41 125 aa7.51□□□□□ -1.21
CMC1-209ENST00000477739 EEF1AKMT3Q96AZ1 226 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms