RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TP53TG3Q9ULZ0 132 aa5.97□□□□□ -1.45
VMA21-203ENST00000477649 U3KQK5 164 aa5.97□□□□□ -1.45
VMA21-203ENST00000477649 APCP25054 2843 aa5.97□□□□□ -1.45
VMA21-203ENST00000477649 POLQO75417 2590 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 TMSB15BA0A087X1C1 80 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 IGKV3D-20A0A0C4DH25 116 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 A0A0J9YX75 114 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 OR4C46A6NHA9 309 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 ASIPP42127 132 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 AMTP48728 403 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 TWIST1Q15672 202 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 KHDC1LQ5JSQ8 128 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 ORMDL3Q8N138 153 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 LINC01006Q8NI28 216 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 DYNLRB2Q8TF09 96 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 CLUHP3Q96NS8 147 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 DNHD1Q96M86 4753 aa5.96□□□□□ -1.46
VMA21-203ENST00000477649 PDZD2O15018 2839 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 A8MTW9 85 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 CCL24O00175 119 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 PPP1R17O96001 155 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 CSN3P07498 182 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 LINC00614P0C842 121 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 NTF3P20783 257 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 S100A4P26447 101 aaKnown RBP5.95□□□□□ -1.46
VMA21-203ENST00000477649 SLURP1P55000 103 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 LINC00310P59036 64 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 TDRG1Q3Y452 100 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 PSMG4Q5JS54 123 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 OR2K2Q8NGT1 345 aa5.95□□□□□ -1.46
VMA21-203ENST00000477649 IGKV3-7A0A075B6H7 116 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 C7orf71A4D174 169 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 TCF21O43680 179 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 LY6G6DO95868 133 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 ZNF688P0C7X2 276 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 CDKN1BP46527 198 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 DEFB114Q30KQ6 69 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 SPANXN1Q5VSR9 72 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 FAM159AQ6UWV7 190 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 Q71RC1 249 aaPredicted RBP5.94□□□□□ -1.46
VMA21-203ENST00000477649 NIT1Q86X76 327 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 WFDC3Q8IUB2 231 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 DEFB125Q8N687 156 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 DLX4Q92988 240 aaPredicted RBP5.94□□□□□ -1.46
VMA21-203ENST00000477649 MRAP2Q96G30 205 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 C20orf144Q9BQM9 153 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 SCRT2Q9NQ03 307 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 NF1P21359 2839 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 ITPR3Q14573 2671 aa5.94□□□□□ -1.46
VMA21-203ENST00000477649 SETD2Q9BYW2 2564 aaPredicted RBP5.94□□□□□ -1.46
VMA21-203ENST00000477649 TSTD3H0UI37 97 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 M0R2Z0 102 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 NUPR1O60356 82 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 HLA-DRB4P13762 266 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 CKS2P33552 79 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 RNASE4P34096 147 aaKnown RBP5.93□□□□□ -1.46
VMA21-203ENST00000477649 PROK1P58294 105 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 PKIAP61925 76 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 RNASEKQ6P5S7 137 aaKnown RBP5.93□□□□□ -1.46
VMA21-203ENST00000477649 FA2HQ7L5A8 372 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 ZNF575Q86XF7 245 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 PRSS3P2Q8NHM4 247 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 PRELID3AQ96N28 172 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 FAM110AQ9BQ89 295 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 NXT2Q9NPJ8 142 aaKnown RBP5.93□□□□□ -1.46
VMA21-203ENST00000477649 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 C11orf21Q9P2W6 132 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 NAGKQ9UJ70 344 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 HSPB8Q9UJY1 196 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 RNF114Q9Y508 228 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 PHLDA3Q9Y5J5 127 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 HLA-DRB4X5D2U9 266 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 C2CD3Q4AC94 2353 aa5.93□□□□□ -1.46
VMA21-203ENST00000477649 TRGV11A0A075B6L2 103 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 PRSS47A8MTI9 375 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 D6R8Y8 96 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 K7EMI3 77 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 NXPH4O95158 308 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 SCGB1D1O95968 90 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 ZNF705DP0CH99 300 aaPredicted RBP5.92□□□□□ -1.46
VMA21-203ENST00000477649 ZNF705BP0CI00 300 aaPredicted RBP5.92□□□□□ -1.46
VMA21-203ENST00000477649 CD28P10747 220 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 TFPI2P48307 235 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 PMCHL1Q16048 86 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 DEFB136Q30KP8 78 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 ANXA2RQ3ZCQ2 193 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 MRPL51Q4U2R6 128 aaKnown RBP5.92□□□□□ -1.46
VMA21-203ENST00000477649 ADAMTSL5Q6ZMM2 481 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 Q6ZWC4 215 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 NDUFA11Q86Y39 141 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 AMN1Q8IY45 258 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 OR10AG1Q8NH19 301 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 RAX2Q96IS3 184 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 RCHY1Q96PM5 261 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 MAP1LC3AQ9H492 121 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 GSN-AS1Q9NRJ2 163 aa5.92□□□□□ -1.46
VMA21-203ENST00000477649 C20orf202A1L168 122 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 F6UB75 175 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 M0R381 172 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 EDN2P20800 178 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms