RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 EMX2Q04743 252 aa1.34□□□□□ -2.19
RBM39-231ENST00000477334 SCIMPQ6UWF3 145 aa1.34□□□□□ -2.19
RBM39-231ENST00000477334 LINC00470Q9BZP3 86 aa1.34□□□□□ -2.19
RBM39-231ENST00000477334 BOKQ9UMX3 212 aaPredicted RBP1.34□□□□□ -2.19
RBM39-231ENST00000477334 ZFP30Q9Y2G7 519 aa1.34□□□□□ -2.19
RBM39-231ENST00000477334 UHRF1BP1LA0JNW5 1464 aa1.34□□□□□ -2.19
RBM39-231ENST00000477334 GRIN2AQ12879 1464 aa1.34□□□□□ -2.19
RBM39-231ENST00000477334 COL4A1P02462 1669 aa1.34□□□□□ -2.19
RBM39-231ENST00000477334 HEATR5BQ9P2D3 2071 aa1.34□□□□□ -2.19
RBM39-231ENST00000477334 TRANK1O15050 2925 aa1.34□□□□□ -2.2
RBM39-231ENST00000477334 LAMB2P55268 1798 aa1.34□□□□□ -2.2
RBM39-231ENST00000477334 KDM6BO15054 1643 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 NAIPQ13075 1403 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 PCNTO95613 3336 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.33□□□□□ -2.2
RBM39-231ENST00000477334 M0R2P5 195 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 IL7P13232 177 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 Q6ZSA8 131 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 KCNRGQ8N5I3 272 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 COPS9Q8WXC6 57 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 OBSCN-AS1Q96MR7 158 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 LIMD2Q9BT23 127 aa1.33□□□□□ -2.2
RBM39-231ENST00000477334 IBTKQ9P2D0 1353 aaPredicted RBP1.33□□□□□ -2.2
RBM39-231ENST00000477334 BAZ2BQ9UIF8 2168 aaKnown RBP1.32□□□□□ -2.2
RBM39-231ENST00000477334 NCOA3Q9Y6Q9 1424 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 TMEM30CPA0ZSE6 113 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 A6NN06 94 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 KLF7O75840 302 aaPredicted RBP1.32□□□□□ -2.2
RBM39-231ENST00000477334 PYYP10082 97 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 SPATA45Q537H7 98 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 ATP11AUNQ6ZP68 121 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 Q6ZUT4 128 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 SLC25A26Q70HW3 274 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 C10orf105Q8TEF2 133 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 LINC00526Q96FQ7 95 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 PDCD10Q9BUL8 212 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 ROCK2O75116 1388 aaKnown RBP1.32□□□□□ -2.2
RBM39-231ENST00000477334 PTPRGP23470 1445 aa1.32□□□□□ -2.2
RBM39-231ENST00000477334 FREM1Q5H8C1 2179 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 ADGRB2O60241 1585 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 WDR97A6NE52 1622 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 TRAV2A0A0B4J234 112 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 RHOHQ15669 191 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 IQCJQ1A5X6 159 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 LINC01545Q5VT33 79 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 VSTM2AQ8TAG5 236 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 DYNLRB2Q8TF09 96 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 PPDPFLQ8WWR9 84 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 TMEM2Q9UHN6 1383 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 ALPK2Q86TB3 2170 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 MED13Q9UHV7 2174 aa1.31□□□□□ -2.2
RBM39-231ENST00000477334 EIF4G3O43432 1585 aaKnown RBP1.3□□□□□ -2.2
RBM39-231ENST00000477334 HELZ2Q9BYK8 2649 aaKnown RBP1.3□□□□□ -2.2
RBM39-231ENST00000477334 A0A0J9YY99 117 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 A0A1B0GV90 55 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 IGKCP01834 107 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 APODP05090 189 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 GYPBP06028 91 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 PRB4P10163 310 aaPredicted RBP1.3□□□□□ -2.2
RBM39-231ENST00000477334 MIC13Q5XKP0 118 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 DMAC1Q96GE9 116 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 ATG5Q9H1Y0 275 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 CEP192Q8TEP8 1941 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 SMG6Q86US8 1419 aaKnown RBP1.3□□□□□ -2.2
RBM39-231ENST00000477334 SDK1Q7Z5N4 2213 aa1.3□□□□□ -2.2
RBM39-231ENST00000477334 KIAA1549LQ6ZVL6 1849 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 FANCMQ8IYD8 2048 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 DLEU1O43261 78 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 IGF2P01344 180 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 APOC1P02654 83 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 IL5P05113 134 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 PIPP12273 146 aaPredicted RBP1.29□□□□□ -2.2
RBM39-231ENST00000477334 RPL37AP61513 92 aaKnown RBP1.29□□□□□ -2.2
RBM39-231ENST00000477334 WHAMMP3Q1A5X7 153 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 OCIAD2Q56VL3 154 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 SPANXN1Q5VSR9 72 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 RPL7L1Q6DKI1 246 aaKnown RBP1.29□□□□□ -2.2
RBM39-231ENST00000477334 LYPD5Q6UWN5 251 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 MED12LQ86YW9 2145 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 TMEM203Q969S6 136 aa1.29□□□□□ -2.2
RBM39-231ENST00000477334 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
RBM39-231ENST00000477334 FREM3P0C091 2139 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 TRBV10-1A0A0K0K1A3 114 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 NUPR2A6NF83 97 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 CCDC179H3BU77 68 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 SNCGO76070 127 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 IGLV3-1P01715 115 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 PDE6GP18545 87 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 SPCS2Q15005 226 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 CSAG1Q6PB30 78 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.28□□□□□ -2.2
RBM39-231ENST00000477334 MRPL36Q9P0J6 103 aaKnown RBP1.28□□□□□ -2.2
RBM39-231ENST00000477334 CDK12Q9NYV4 1490 aaPredicted RBP1.28□□□□□ -2.2
RBM39-231ENST00000477334 BAZ1AQ9NRL2 1556 aaPredicted RBP1.28□□□□□ -2.2
RBM39-231ENST00000477334 PCDH15Q96QU1 1955 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 SCN3AQ9NY46 2000 aa1.28□□□□□ -2.2
RBM39-231ENST00000477334 CHD8Q9HCK8 2581 aa1.27□□□□□ -2.21
RBM39-231ENST00000477334 MYH1P12882 1939 aa1.27□□□□□ -2.21
RBM39-231ENST00000477334 CDK5RAP2Q96SN8 1893 aa1.27□□□□□ -2.21
RBM39-231ENST00000477334 TRAV12-2A0A075B6T6 113 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms