RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CTSZQ9UBR2 303 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 IGLV3-9A0A075B6K5 115 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 TRGV11A0A075B6L2 103 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 ENSAO43768 121 aaKnown RBP8.16□□□□□ -1.1
ABCF1-205ENST00000475993 TEX49A0A1B0GTD5 131 aa8.15□□□□□ -1.1
ABCF1-205ENST00000475993 CDX4O14627 284 aaPredicted RBP8.15□□□□□ -1.1
ABCF1-205ENST00000475993 COX6B1P14854 86 aa8.15□□□□□ -1.1
ABCF1-205ENST00000475993 ZNF672Q499Z4 452 aaPredicted RBP8.15□□□□□ -1.1
ABCF1-205ENST00000475993 TMEM200BQ69YZ2 307 aa8.15□□□□□ -1.1
ABCF1-205ENST00000475993 Q8TAT8 98 aa8.15□□□□□ -1.1
ABCF1-205ENST00000475993 SLC25A15Q9Y619 301 aa8.15□□□□□ -1.1
ABCF1-205ENST00000475993 M0R2P5 195 aa8.15□□□□□ -1.11
ABCF1-205ENST00000475993 ORM1P02763 201 aa8.15□□□□□ -1.11
ABCF1-205ENST00000475993 CNTFRP26992 372 aa8.15□□□□□ -1.11
ABCF1-205ENST00000475993 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.11
ABCF1-205ENST00000475993 TNFAIP6P98066 277 aaPredicted RBP8.15□□□□□ -1.11
ABCF1-205ENST00000475993 CEMP1Q6PRD7 247 aaPredicted RBP8.15□□□□□ -1.11
ABCF1-205ENST00000475993 IL17RELQ6ZVW7 336 aa8.15□□□□□ -1.11
ABCF1-205ENST00000475993 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.11
ABCF1-205ENST00000475993 CADP27708 2225 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 IGHV3-72A0A0B4J1Y9 119 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 ZNF815PA8K554 130 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 SEC61GP60059 68 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 URB1O60287 2271 aaKnown RBP8.14□□□□□ -1.11
ABCF1-205ENST00000475993 K7EIM0 57 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 IGHV1-46P01743 117 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 PMVKQ15126 192 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 GAGE2AQ6NT46 116 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 NEXN-AS1Q8NBZ9 246 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
ABCF1-205ENST00000475993 AHCTF1Q8WYP5 2266 aa8.13□□□□□ -1.11
ABCF1-205ENST00000475993 TIMM23O14925 209 aa8.13□□□□□ -1.11
ABCF1-205ENST00000475993 UQCRQO14949 82 aa8.13□□□□□ -1.11
ABCF1-205ENST00000475993 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
ABCF1-205ENST00000475993 C9orf106Q8NAJ2 232 aa8.13□□□□□ -1.11
ABCF1-205ENST00000475993 CACNA1GO43497 2377 aa8.13□□□□□ -1.11
ABCF1-205ENST00000475993 DSPP15924 2871 aaKnown RBP8.12□□□□□ -1.11
ABCF1-205ENST00000475993 TRGV3P03979 118 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 ZNF576Q9H609 170 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 COL27A1Q8IZC6 1860 aaPredicted RBP8.12□□□□□ -1.11
ABCF1-205ENST00000475993 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 CFC1P0CG37 223 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 ZNRF2Q8NHG8 242 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 TRAV26-2A0A0B4J265 109 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 CD3EP07766 207 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 TDHQ8IZJ6 230 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 VKORC1Q9BQB6 163 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 CFAP47Q6ZTR5 3102 aa8.12□□□□□ -1.11
ABCF1-205ENST00000475993 WDFY4Q6ZS81 3184 aa8.11□□□□□ -1.11
ABCF1-205ENST00000475993 SLC25A16P16260 332 aa8.11□□□□□ -1.11
ABCF1-205ENST00000475993 TMEM105Q8N8V8 129 aa8.11□□□□□ -1.11
ABCF1-205ENST00000475993 SCGB3A1Q96QR1 104 aa8.11□□□□□ -1.11
ABCF1-205ENST00000475993 A0A0J9YY99 117 aa8.11□□□□□ -1.11
ABCF1-205ENST00000475993 M0R1B8 84 aa8.11□□□□□ -1.11
ABCF1-205ENST00000475993 PMS2CLQ68D20 193 aa8.11□□□□□ -1.11
ABCF1-205ENST00000475993 ICE1Q9Y2F5 2266 aa8.1□□□□□ -1.11
ABCF1-205ENST00000475993 IGHG3P01860 377 aa8.1□□□□□ -1.11
ABCF1-205ENST00000475993 IGFBPL1Q8WX77 278 aa8.1□□□□□ -1.11
ABCF1-205ENST00000475993 SMIM2Q9BVW6 85 aa8.1□□□□□ -1.11
ABCF1-205ENST00000475993 DLX6P56179 175 aa8.1□□□□□ -1.11
ABCF1-205ENST00000475993 ERCC8Q13216 396 aa8.1□□□□□ -1.11
ABCF1-205ENST00000475993 LINC00527Q9UJ94 153 aa8.1□□□□□ -1.11
ABCF1-205ENST00000475993 PLCE1Q9P212 2302 aa8.1□□□□□ -1.11
ABCF1-205ENST00000475993 DMDP11532 3685 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 TINCRA0A1B0GVN0 87 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 IGHV3-30P01768 117 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 IGHV3-30-5P0DP03 117 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 RPL35AP18077 110 aaKnown RBP8.09□□□□□ -1.11
ABCF1-205ENST00000475993 ORMDL2Q53FV1 153 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 KLHL30-AS1Q8NEE0 82 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 LINC01600Q96MT4 127 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 PRO1854Q9UHT4 67 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 MUC3AQ02505 3323 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 HLA-DMBP28068 263 aa8.09□□□□□ -1.11
ABCF1-205ENST00000475993 LGALS9O00182 355 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 OXTP01178 125 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 POM121L12Q8N7R1 296 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 DPH3Q96FX2 82 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 ZGRF1Q86YA3 2104 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 IGHV7-4-1A0A0J9YVY3 117 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 PATE3B3GLJ2 98 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 Q5XG85 94 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 KLK15Q9H2R5 256 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 MALRD1Q5VYJ5 2156 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 IGHV4-4A0A075B6R2 117 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 TRBV7-7A0A0K0K1E9 115 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 H7C2G1 150 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 IGFL4Q6B9Z1 124 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 GFRALQ6UXV0 394 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 DYNAPQ8N1N2 210 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 C11orf21Q9P2W6 132 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 ZNF256Q9Y2P7 627 aaPredicted RBP8.08□□□□□ -1.12
ABCF1-205ENST00000475993 SMAD5-AS1Q9Y6J3 95 aa8.08□□□□□ -1.12
ABCF1-205ENST00000475993 PRRC2CQ9Y520 2896 aaKnown RBP8.07□□□□□ -1.12
ABCF1-205ENST00000475993 H3BMM0 161 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms