RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912		H7C1H1	209 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	GSTZ1	O43708	216 aa	Predicted RBP	2.56	□□□□□ -2
PRKD3-208	ENST00000475912	IGKV1-39	P01597	117 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	RLN2	P04090	185 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	IGKV1D-39	P04432	117 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	RNASE2	P10153	161 aa	Known RBP	2.56	□□□□□ -2
PRKD3-208	ENST00000475912	RAB4A	P20338	218 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	GADD45A	P24522	165 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	OR10J1	P30954	320 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	YPEL3	P61236	119 aa	Predicted RBP	2.56	□□□□□ -2
PRKD3-208	ENST00000475912	ERH	P84090	104 aa	Known RBP	2.56	□□□□□ -2
PRKD3-208	ENST00000475912	ORMDL2	Q53FV1	153 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	HACD4	Q5VWC8	232 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	PRSS54	Q6PEW0	395 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	TMEM256	Q8N2U0	113 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	C10orf126	Q8N4M7	172 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	C11orf72	Q8NBR9	251 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912		Q8WTZ3	238 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	TMEM203	Q969S6	136 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	CENPN	Q96H22	339 aa	Predicted RBP	2.56	□□□□□ -2
PRKD3-208	ENST00000475912	TSC22D3	Q99576	134 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	RPRM	Q9NS64	109 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	FKBP11	Q9NYL4	201 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	RAB22A	Q9UL26	194 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	AP4S1	Q9Y587	144 aa		2.56	□□□□□ -2
PRKD3-208	ENST00000475912	TRAV30	A0A087WSZ9	112 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	TRAV8-2	A0A0B4J237	113 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	TRAV5	A0A0B4J249	113 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912		A6NDN8	102 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	IBA57-AS1	B1ANH7	110 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912		H7BYZ3	331 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	PGLYRP1	O75594	196 aa	Predicted RBP	2.55	□□□□□ -2
PRKD3-208	ENST00000475912	SNCA	P37840	140 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	ETV6	P41212	452 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	RPL5	P46777	297 aa	Known RBP	2.55	□□□□□ -2
PRKD3-208	ENST00000475912	HSPA13	P48723	471 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	HSPE1	P61604	102 aa	Known RBP	2.55	□□□□□ -2
PRKD3-208	ENST00000475912	RAB11A	P62491	216 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	SLA	Q13239	276 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	ZNF266	Q14584	549 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	BSX	Q3C1V8	233 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	CDNF	Q49AH0	187 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	SFXN4	Q6P4A7	337 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	TMEM91	Q6ZNR0	172 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	NEGR1	Q7Z3B1	354 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	RNF182	Q8N6D2	247 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	RBPMS	Q93062	196 aa	Known RBP	2.55	□□□□□ -2
PRKD3-208	ENST00000475912	ORC6	Q9Y5N6	252 aa		2.55	□□□□□ -2
PRKD3-208	ENST00000475912	IGLV4-60	A0A075B6I1	120 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	IGLV1-50	A0A075B6I6	118 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	TRGV2	A0A075B6R0	118 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912		A0A0J9YXV3	536 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	LOC100130705	A0A1B0GUX0	176 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	EFCAB10	A6NFE3	127 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	RBFOX3	A6NFN3	312 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	CORT	O00230	105 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	IGHV3-53	P01767	116 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	RD3L	P0DJH9	198 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	CRYBA4	P53673	196 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	OR10A3	P58181	314 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	ARPC4	P59998	168 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	SUPT4H1	P63272	117 aa	Known RBP	2.54	□□□□□ -2
PRKD3-208	ENST00000475912	SYCN	Q0VAF6	134 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	LINC01556	Q5JQF7	62 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	NTM-AS1	Q6ZSK4	140 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	ARRDC1	Q8N5I2	433 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	C15orf40	Q8WUR7	153 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	TIMM17A	Q99595	171 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	NDFIP1	Q9BT67	221 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	PBDC1	Q9BVG4	233 aa		2.54	□□□□□ -2
PRKD3-208	ENST00000475912	PARD6G	Q9BYG4	376 aa	Predicted RBP	2.54	□□□□□ -2
PRKD3-208	ENST00000475912	IGKV1D-37	A0A075B6S9	117 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	IRGM	A1A4Y4	181 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	MYL12B	O14950	172 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	GYG2	O15488	501 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	MED6	O75586	246 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	IGHV3-30	P01768	117 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	IGHV3-33	P01772	117 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	OR5AC1	P0C628	307 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	IGHV3-30-3	P0DP02	117 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	IGHV3-30-5	P0DP03	117 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	PSMA1	P25786	263 aa	Known RBP	2.53	□□□□□ -2
PRKD3-208	ENST00000475912	PSMB9	P28065	219 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	SRI	P30626	198 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	RHOB	P62745	196 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	RPS25	P62851	125 aa	Known RBP	2.53	□□□□□ -2
PRKD3-208	ENST00000475912	HIST1H1A	Q02539	215 aa	Predicted RBP	2.53	□□□□□ -2
PRKD3-208	ENST00000475912	PSG3	Q16557	428 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	C1orf194	Q5T5A4	169 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	LAIR2	Q6ISS4	152 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	SLC35G3	Q8N808	338 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.53	□□□□□ -2
PRKD3-208	ENST00000475912	BAALC	Q8WXS3	180 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	ATG5	Q9H1Y0	275 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	DPH3P1	Q9H4G8	78 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	PRO0255	Q9UI72	69 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	HHLA3	Q9XRX5	114 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	FUT9	Q9Y231	359 aa		2.53	□□□□□ -2
PRKD3-208	ENST00000475912	LSM2	Q9Y333	95 aa	Known RBP	2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms