RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 IL36BQ9NZH7 164 aa11.41□□□□□ -0.58
CPSF3-203ENST00000475482 V9GYV3 84 aa11.41□□□□□ -0.58
CPSF3-203ENST00000475482 F6UB75 175 aa11.4□□□□□ -0.58
CPSF3-203ENST00000475482 ZNF705DP0CH99 300 aaPredicted RBP11.4□□□□□ -0.58
CPSF3-203ENST00000475482 ZNF705BP0CI00 300 aaPredicted RBP11.4□□□□□ -0.58
CPSF3-203ENST00000475482 PRB4P10163 310 aaPredicted RBP11.4□□□□□ -0.58
CPSF3-203ENST00000475482 CRISP2P16562 243 aa11.4□□□□□ -0.58
CPSF3-203ENST00000475482 RPS20P60866 119 aaKnown RBP11.4□□□□□ -0.58
CPSF3-203ENST00000475482 CSTL1Q9H114 145 aa11.4□□□□□ -0.58
CPSF3-203ENST00000475482 GPX1P07203 203 aa11.39□□□□□ -0.59
CPSF3-203ENST00000475482 PFN1P07737 140 aaKnown RBP11.39□□□□□ -0.59
CPSF3-203ENST00000475482 HLA-DRB4P13762 266 aa11.39□□□□□ -0.59
CPSF3-203ENST00000475482 FAM19A4Q96LR4 140 aa11.39□□□□□ -0.59
CPSF3-203ENST00000475482 GFRA4Q9GZZ7 299 aa11.39□□□□□ -0.59
CPSF3-203ENST00000475482 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
CPSF3-203ENST00000475482 HLA-DRB4X5D2U9 266 aa11.39□□□□□ -0.59
CPSF3-203ENST00000475482 A0A0J9YWU9 116 aa11.38□□□□□ -0.59
CPSF3-203ENST00000475482 FAM231BA6NCW3 169 aa11.38□□□□□ -0.59
CPSF3-203ENST00000475482 SH2D1AO60880 128 aa11.38□□□□□ -0.59
CPSF3-203ENST00000475482 ELOBQ15370 118 aa11.38□□□□□ -0.59
CPSF3-203ENST00000475482 ACTL10Q5JWF8 245 aa11.38□□□□□ -0.59
CPSF3-203ENST00000475482 OR2D3Q8NGH3 330 aa11.38□□□□□ -0.59
CPSF3-203ENST00000475482 TSKUQ8WUA8 353 aa11.38□□□□□ -0.59
CPSF3-203ENST00000475482 CLUHP3Q96NS8 147 aa11.38□□□□□ -0.59
CPSF3-203ENST00000475482 TRAV21A0A0B4J279 112 aa11.37□□□□□ -0.59
CPSF3-203ENST00000475482 TMEM189A5PLL7 270 aa11.37□□□□□ -0.59
CPSF3-203ENST00000475482 GDF5OSQ5U4N7 250 aa11.37□□□□□ -0.59
CPSF3-203ENST00000475482 Q6AWC8 147 aa11.37□□□□□ -0.59
CPSF3-203ENST00000475482 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.37□□□□□ -0.59
CPSF3-203ENST00000475482 HYDINQ4G0P3 5121 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 TRBV24-1A0A075B6N3 115 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 SMIM27A0A1W2PRY6 76 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 A8MTW9 85 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 H3BMM0 161 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 CDKN1BP46527 198 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 CRIP1P50238 77 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 DEFB1P60022 68 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 STHQ8IWL8 128 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 NAT8BQ9UHF3 227 aa11.36□□□□□ -0.59
CPSF3-203ENST00000475482 A0A1W2PPQ1 181 aa11.35□□□□□ -0.59
CPSF3-203ENST00000475482 COLCA2A8K830 154 aa11.35□□□□□ -0.59
CPSF3-203ENST00000475482 KLLNB2CW77 178 aa11.35□□□□□ -0.59
CPSF3-203ENST00000475482 AMBPP02760 352 aa11.35□□□□□ -0.59
CPSF3-203ENST00000475482 ORM1P02763 201 aa11.35□□□□□ -0.59
CPSF3-203ENST00000475482 GIG44P09565 113 aaPredicted RBP11.35□□□□□ -0.59
CPSF3-203ENST00000475482 NUTF2P61970 127 aaKnown RBP11.35□□□□□ -0.59
CPSF3-203ENST00000475482 LINC01559Q495D7 138 aa11.35□□□□□ -0.59
CPSF3-203ENST00000475482 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
CPSF3-203ENST00000475482 KNCNA6PVL3 124 aa11.34□□□□□ -0.59
CPSF3-203ENST00000475482 RNASE4P34096 147 aaKnown RBP11.34□□□□□ -0.59
CPSF3-203ENST00000475482 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
CPSF3-203ENST00000475482 FAM3BP58499 235 aaPredicted RBP11.34□□□□□ -0.59
CPSF3-203ENST00000475482 COX19Q49B96 90 aa11.34□□□□□ -0.59
CPSF3-203ENST00000475482 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
CPSF3-203ENST00000475482 BORCS7Q96B45 105 aa11.34□□□□□ -0.59
CPSF3-203ENST00000475482 FAM210BQ96KR6 192 aa11.34□□□□□ -0.59
CPSF3-203ENST00000475482 YPEL4Q96NS1 127 aa11.34□□□□□ -0.59
CPSF3-203ENST00000475482 PYGO2Q9BRQ0 406 aa11.34□□□□□ -0.59
CPSF3-203ENST00000475482 C7orf71A4D174 169 aa11.33□□□□□ -0.6
CPSF3-203ENST00000475482 IGKV3-20P01619 116 aa11.33□□□□□ -0.6
CPSF3-203ENST00000475482 CXCL1P09341 107 aa11.33□□□□□ -0.6
CPSF3-203ENST00000475482 RAB5AP20339 215 aa11.33□□□□□ -0.6
CPSF3-203ENST00000475482 NEU1Q99519 415 aa11.33□□□□□ -0.6
CPSF3-203ENST00000475482 TGIF2-C20orf24A0A0A6YYL0 155 aa11.32□□□□□ -0.6
CPSF3-203ENST00000475482 HIGD1CA8MV81 97 aa11.32□□□□□ -0.6
CPSF3-203ENST00000475482 J3KRW8 73 aa11.32□□□□□ -0.6
CPSF3-203ENST00000475482 CA1P00915 261 aaPredicted RBP11.32□□□□□ -0.6
CPSF3-203ENST00000475482 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
CPSF3-203ENST00000475482 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
CPSF3-203ENST00000475482 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
CPSF3-203ENST00000475482 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
CPSF3-203ENST00000475482 TYMSP04818 313 aa11.31□□□□□ -0.6
CPSF3-203ENST00000475482 TCL1AP56279 114 aa11.31□□□□□ -0.6
CPSF3-203ENST00000475482 SPINK13Q1W4C9 94 aa11.31□□□□□ -0.6
CPSF3-203ENST00000475482 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
CPSF3-203ENST00000475482 RASL11AQ6T310 242 aa11.31□□□□□ -0.6
CPSF3-203ENST00000475482 FAM159AQ6UWV7 190 aa11.31□□□□□ -0.6
CPSF3-203ENST00000475482 ATP5L2Q7Z4Y8 100 aa11.31□□□□□ -0.6
CPSF3-203ENST00000475482 OR11H2Q8NH07 326 aa11.31□□□□□ -0.6
CPSF3-203ENST00000475482 C20orf144Q9BQM9 153 aa11.31□□□□□ -0.6
CPSF3-203ENST00000475482 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
CPSF3-203ENST00000475482 PRR9Q5T870 116 aa11.3□□□□□ -0.6
CPSF3-203ENST00000475482 WDR73Q6P4I2 378 aa11.3□□□□□ -0.6
CPSF3-203ENST00000475482 CEMP1Q6PRD7 247 aaPredicted RBP11.3□□□□□ -0.6
CPSF3-203ENST00000475482 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
CPSF3-203ENST00000475482 NUP35Q8NFH5 326 aa11.3□□□□□ -0.6
CPSF3-203ENST00000475482 A0A1B0GW15 77 aa11.29□□□□□ -0.6
CPSF3-203ENST00000475482 F2Z2F3 143 aa11.29□□□□□ -0.6
CPSF3-203ENST00000475482 M0R2Z0 102 aa11.29□□□□□ -0.6
CPSF3-203ENST00000475482 S100A8P05109 93 aa11.29□□□□□ -0.6
CPSF3-203ENST00000475482 RPS10P46783 165 aaKnown RBP11.29□□□□□ -0.6
CPSF3-203ENST00000475482 GFI1BQ5VTD9 330 aa11.29□□□□□ -0.6
CPSF3-203ENST00000475482 FER1L6-AS1Q8NA97 138 aa11.29□□□□□ -0.6
CPSF3-203ENST00000475482 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
CPSF3-203ENST00000475482 NAGKQ9UJ70 344 aa11.29□□□□□ -0.6
CPSF3-203ENST00000475482 TMSB15BA0A087X1C1 80 aa11.28□□□□□ -0.6
CPSF3-203ENST00000475482 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
CPSF3-203ENST00000475482 INSP01308 110 aa11.28□□□□□ -0.6
CPSF3-203ENST00000475482 RIGQ13278 110 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms