RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 GNRH2O43555 120 aa16.72■□□□□ 0.27
TMEM54-205ENST00000475208 PPT1P50897 306 aa16.72■□□□□ 0.27
TMEM54-205ENST00000475208 KHDC3LQ587J8 217 aa16.72■□□□□ 0.27
TMEM54-205ENST00000475208 FFAR4Q5NUL3 377 aa16.72■□□□□ 0.27
TMEM54-205ENST00000475208 TMED6Q8WW62 240 aa16.72■□□□□ 0.27
TMEM54-205ENST00000475208 BATF3Q9NR55 127 aa16.72■□□□□ 0.27
TMEM54-205ENST00000475208 IGHV3-16A0A0C4DH30 117 aa16.71■□□□□ 0.27
TMEM54-205ENST00000475208 TIRAPP58753 221 aa16.71■□□□□ 0.27
TMEM54-205ENST00000475208 TMEM70Q9BUB7 260 aa16.71■□□□□ 0.27
TMEM54-205ENST00000475208 RPH3ALQ9UNE2 315 aa16.71■□□□□ 0.27
TMEM54-205ENST00000475208 H2BFSP57053 126 aa16.7■□□□□ 0.26
TMEM54-205ENST00000475208 TAS2R45P59539 299 aa16.7■□□□□ 0.26
TMEM54-205ENST00000475208 DEFA1P59665 94 aa16.7■□□□□ 0.26
TMEM54-205ENST00000475208 DEFA3P59666 94 aa16.7■□□□□ 0.26
TMEM54-205ENST00000475208 CYCSP99999 105 aaKnown RBP16.7■□□□□ 0.26
TMEM54-205ENST00000475208 Q6ZSN1 163 aa16.7■□□□□ 0.26
TMEM54-205ENST00000475208 NTN5Q8WTR8 489 aaPredicted RBP16.7■□□□□ 0.26
TMEM54-205ENST00000475208 ATP5SQ99766 215 aa16.7■□□□□ 0.26
TMEM54-205ENST00000475208 EIF3GO75821 320 aaKnown RBP eCLIP16.69■□□□□ 0.26
TMEM54-205ENST00000475208 TYMSP04818 313 aa16.69■□□□□ 0.26
TMEM54-205ENST00000475208 GATA1P15976 413 aaPredicted RBP16.69■□□□□ 0.26
TMEM54-205ENST00000475208 LINC01556Q5JQF7 62 aa16.69■□□□□ 0.26
TMEM54-205ENST00000475208 OTORQ9NRC9 128 aa16.69■□□□□ 0.26
TMEM54-205ENST00000475208 TRAV21A0A0B4J279 112 aa16.68■□□□□ 0.26
TMEM54-205ENST00000475208 F6UZH7 168 aa16.68■□□□□ 0.26
TMEM54-205ENST00000475208 CMTM2Q8TAZ6 248 aa16.68■□□□□ 0.26
TMEM54-205ENST00000475208 PGPA6NDG6 321 aa16.67■□□□□ 0.26
TMEM54-205ENST00000475208 IBA57-AS1B1ANH7 110 aa16.67■□□□□ 0.26
TMEM54-205ENST00000475208 GOLT1AQ6ZVE7 132 aa16.67■□□□□ 0.26
TMEM54-205ENST00000475208 Q9HAA7 133 aa16.67■□□□□ 0.26
TMEM54-205ENST00000475208 Q8N814 137 aa16.66■□□□□ 0.26
TMEM54-205ENST00000475208 PPP1R1CQ8WVI7 109 aa16.66■□□□□ 0.26
TMEM54-205ENST00000475208 SDF2L1Q9HCN8 221 aa16.66■□□□□ 0.26
TMEM54-205ENST00000475208 TRAV8-6A0A0B4J262 113 aa16.65■□□□□ 0.26
TMEM54-205ENST00000475208 FBLL1A6NHQ2 334 aaKnown RBP16.65■□□□□ 0.26
TMEM54-205ENST00000475208 OR10J3Q5JRS4 329 aa16.65■□□□□ 0.26
TMEM54-205ENST00000475208 FAM74A1Q5RGS3 127 aa16.65■□□□□ 0.26
TMEM54-205ENST00000475208 TVP23CQ96ET8 276 aa16.65■□□□□ 0.26
TMEM54-205ENST00000475208 MBD2Q9UBB5 411 aa16.65■□□□□ 0.26
TMEM54-205ENST00000475208 HSPB11Q9Y547 144 aa16.65■□□□□ 0.26
TMEM54-205ENST00000475208 TRAV8-1A0A0A6YYK1 113 aa16.64■□□□□ 0.25
TMEM54-205ENST00000475208 SSNA1O43805 119 aa16.64■□□□□ 0.25
TMEM54-205ENST00000475208 PFN1P07737 140 aaKnown RBP16.64■□□□□ 0.25
TMEM54-205ENST00000475208 SLC25A29Q8N8R3 303 aa16.64■□□□□ 0.25
TMEM54-205ENST00000475208 SCGB1C1Q8TD33 95 aa16.64■□□□□ 0.25
TMEM54-205ENST00000475208 TREM1Q9NP99 234 aa16.64■□□□□ 0.25
TMEM54-205ENST00000475208 DNAH8Q96JB1 4490 aa16.64■□□□□ 0.25
TMEM54-205ENST00000475208 KCNS1Q96KK3 526 aa16.63■□□□□ 0.25
TMEM54-205ENST00000475208 SMIM3Q9BZL3 60 aa16.63■□□□□ 0.25
TMEM54-205ENST00000475208 MPC2O95563 127 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 IGHV3-30P01768 117 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 IGHV3-33P01772 117 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 IGHV3-30-3P0DP02 117 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 IGHV3-30-5P0DP03 117 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 ASB13Q8WXK3 278 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 PRADC1Q9BSG0 188 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 FAM30AQ9NZY2 134 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 BOLA1Q9Y3E2 137 aa16.62■□□□□ 0.25
TMEM54-205ENST00000475208 GNG5P63218 68 aa16.61■□□□□ 0.25
TMEM54-205ENST00000475208 RHOHQ15669 191 aa16.61■□□□□ 0.25
TMEM54-205ENST00000475208 ARL6IP6Q8N6S5 226 aa16.61■□□□□ 0.25
TMEM54-205ENST00000475208 ZNF876PQ49A33 203 aa16.6■□□□□ 0.25
TMEM54-205ENST00000475208 CFAP126Q5VTH2 177 aa16.6■□□□□ 0.25
TMEM54-205ENST00000475208 PQLC2Q6ZP29 291 aa16.6■□□□□ 0.25
TMEM54-205ENST00000475208 IGHV3-73A0A0B4J1V6 119 aa16.59■□□□□ 0.25
TMEM54-205ENST00000475208 TRBV6-4A0A1B0GX49 114 aa16.59■□□□□ 0.25
TMEM54-205ENST00000475208 RS1O15537 224 aa16.59■□□□□ 0.25
TMEM54-205ENST00000475208 LELP1Q5T871 98 aa16.59■□□□□ 0.25
TMEM54-205ENST00000475208 DPPA3Q6W0C5 159 aa16.59■□□□□ 0.25
TMEM54-205ENST00000475208 PET100P0DJ07 73 aa16.58■□□□□ 0.24
TMEM54-205ENST00000475208 ACOT6Q3I5F7 207 aaPredicted RBP16.58■□□□□ 0.24
TMEM54-205ENST00000475208 SGK494Q96LW2 274 aa16.58■□□□□ 0.24
TMEM54-205ENST00000475208 A0A1W2PPV4 95 aa16.57■□□□□ 0.24
TMEM54-205ENST00000475208 J3QL48 77 aa16.57■□□□□ 0.24
TMEM54-205ENST00000475208 CIDEAO60543 219 aa16.57■□□□□ 0.24
TMEM54-205ENST00000475208 RPL12P30050 165 aaKnown RBP16.57■□□□□ 0.24
TMEM54-205ENST00000475208 NDFIP1Q9BT67 221 aa16.57■□□□□ 0.24
TMEM54-205ENST00000475208 C1QBP02746 253 aa16.56■□□□□ 0.24
TMEM54-205ENST00000475208 RAB2AP61019 212 aa16.56■□□□□ 0.24
TMEM54-205ENST00000475208 LAGE3Q14657 143 aa16.56■□□□□ 0.24
TMEM54-205ENST00000475208 C11orf21Q9P2W6 132 aa16.56■□□□□ 0.24
TMEM54-205ENST00000475208 HMGB3O15347 200 aaKnown RBP16.55■□□□□ 0.24
TMEM54-205ENST00000475208 ZNF80P51504 273 aaPredicted RBP16.55■□□□□ 0.24
TMEM54-205ENST00000475208 WFDC2Q14508 124 aa16.55■□□□□ 0.24
TMEM54-205ENST00000475208 ATP6V0E2Q8NHE4 81 aa16.55■□□□□ 0.24
TMEM54-205ENST00000475208 TM2D2Q9BX73 214 aa16.55■□□□□ 0.24
TMEM54-205ENST00000475208 GTSF1LQ9H1H1 148 aa16.55■□□□□ 0.24
TMEM54-205ENST00000475208 WFDC1Q9HC57 220 aa16.55■□□□□ 0.24
TMEM54-205ENST00000475208 C9orf85Q96MD7 179 aa16.54■□□□□ 0.24
TMEM54-205ENST00000475208 ALG5Q9Y673 324 aa16.54■□□□□ 0.24
TMEM54-205ENST00000475208 MGST1P10620 155 aaKnown RBP16.53■□□□□ 0.24
TMEM54-205ENST00000475208 ZNF506Q5JVG8 444 aa16.53■□□□□ 0.24
TMEM54-205ENST00000475208 TMEM75Q8N9X5 138 aa16.53■□□□□ 0.24
TMEM54-205ENST00000475208 SERTM2A0A1B0GWG4 89 aa16.52■□□□□ 0.24
TMEM54-205ENST00000475208 PGPEP1LA6NFU8 196 aa16.52■□□□□ 0.24
TMEM54-205ENST00000475208 TAAR5O14804 337 aa16.52■□□□□ 0.24
TMEM54-205ENST00000475208 Q8N3U1 123 aa16.52■□□□□ 0.24
TMEM54-205ENST00000475208 PTTG1O95997 202 aa16.51■□□□□ 0.23
TMEM54-205ENST00000475208 GCGP01275 180 aa16.51■□□□□ 0.23
TMEM54-205ENST00000475208 ARL14EPLP0DKL9 152 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms