RNA–Protein interactions for RNA: ENST00000474952.5

TFAP2A-210, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-210ENST00000474952 AGRNO00468 2067 aa18.3■□□□□ 0.52
TFAP2A-210ENST00000474952 NIPBLQ6KC79 2804 aaeCLIP18.29■□□□□ 0.52
TFAP2A-210ENST00000474952 SORL1Q92673 2214 aa18.29■□□□□ 0.52
TFAP2A-210ENST00000474952 C7orf71A4D174 169 aa18.28■□□□□ 0.52
TFAP2A-210ENST00000474952 M0R2Z0 102 aa18.28■□□□□ 0.52
TFAP2A-210ENST00000474952 CDKN1BP46527 198 aa18.28■□□□□ 0.52
TFAP2A-210ENST00000474952 NDUFA6P56556 154 aa18.28■□□□□ 0.52
TFAP2A-210ENST00000474952 SPINK13Q1W4C9 94 aa18.28■□□□□ 0.52
TFAP2A-210ENST00000474952 SNRPEP62304 92 aaKnown RBP18.27■□□□□ 0.52
TFAP2A-210ENST00000474952 GFI1BQ5VTD9 330 aa18.27■□□□□ 0.52
TFAP2A-210ENST00000474952 A0A1B0GW15 77 aa18.27■□□□□ 0.51
TFAP2A-210ENST00000474952 C5orf52A6NGY3 159 aa18.27■□□□□ 0.51
TFAP2A-210ENST00000474952 APCSP02743 223 aa18.27■□□□□ 0.51
TFAP2A-210ENST00000474952 TRAV12-2A0A075B6T6 113 aa18.26■□□□□ 0.51
TFAP2A-210ENST00000474952 TRAV12-3A0A0B4J271 114 aa18.26■□□□□ 0.51
TFAP2A-210ENST00000474952 OR11H12B2RN74 326 aa18.26■□□□□ 0.51
TFAP2A-210ENST00000474952 SLAQ13239 276 aa18.26■□□□□ 0.51
TFAP2A-210ENST00000474952 ANXA2RQ3ZCQ2 193 aa18.26■□□□□ 0.51
TFAP2A-210ENST00000474952 MUC21Q5SSG8 566 aa18.26■□□□□ 0.51
TFAP2A-210ENST00000474952 SSBP4Q9BWG4 385 aaPredicted RBP18.26■□□□□ 0.51
TFAP2A-210ENST00000474952 RBMY1BA6NDE4 496 aaKnown RBP18.25■□□□□ 0.51
TFAP2A-210ENST00000474952 RBMY1EA6NEQ0 496 aaKnown RBP18.25■□□□□ 0.51
TFAP2A-210ENST00000474952 ZNF324O75467 553 aaPredicted RBP18.25■□□□□ 0.51
TFAP2A-210ENST00000474952 S100A8P05109 93 aa18.25■□□□□ 0.51
TFAP2A-210ENST00000474952 RBMY1DP0C7P1 496 aaKnown RBP18.25■□□□□ 0.51
TFAP2A-210ENST00000474952 CMC4P56277 68 aaPredicted RBP18.25■□□□□ 0.51
TFAP2A-210ENST00000474952 PRIMA1Q86XR5 153 aa18.25■□□□□ 0.51
TFAP2A-210ENST00000474952 MUC21A0A0G2JKD1 596 aa18.24■□□□□ 0.51
TFAP2A-210ENST00000474952 MUC21A0A140T8X8 626 aa18.24■□□□□ 0.51
TFAP2A-210ENST00000474952 F2Z2F3 143 aa18.24■□□□□ 0.51
TFAP2A-210ENST00000474952 BEAN1Q3B7T3 259 aa18.24■□□□□ 0.51
TFAP2A-210ENST00000474952 KIAA1644Q3SXP7 199 aa18.24■□□□□ 0.51
TFAP2A-210ENST00000474952 JMJD1CQ15652 2540 aa18.24■□□□□ 0.51
TFAP2A-210ENST00000474952 GATD1Q8NB37 220 aa18.23■□□□□ 0.51
TFAP2A-210ENST00000474952 SPATA3Q8NHX4 192 aa18.23■□□□□ 0.51
TFAP2A-210ENST00000474952 CNFNQ9BYD5 112 aa18.23■□□□□ 0.51
TFAP2A-210ENST00000474952 FXYD7P58549 80 aa18.23■□□□□ 0.51
TFAP2A-210ENST00000474952 SSTP61278 116 aa18.23■□□□□ 0.51
TFAP2A-210ENST00000474952 PRR31Q5SQ13 230 aa18.23■□□□□ 0.51
TFAP2A-210ENST00000474952 CLUHP3Q96NS8 147 aa18.22■□□□□ 0.51
TFAP2A-210ENST00000474952 SNAI2O43623 268 aa18.21■□□□□ 0.51
TFAP2A-210ENST00000474952 OR5AL1P0C617 328 aa18.21■□□□□ 0.51
TFAP2A-210ENST00000474952 INSL3P51460 131 aa18.21■□□□□ 0.51
TFAP2A-210ENST00000474952 FAM159AQ6UWV7 190 aa18.21■□□□□ 0.51
TFAP2A-210ENST00000474952 FAM110AQ9BQ89 295 aa18.21■□□□□ 0.51
TFAP2A-210ENST00000474952 GNRH2O43555 120 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 NTF3P20783 257 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 ASIPP42127 132 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 TWIST1Q15672 202 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 C9orf66Q5T8R8 295 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 KCNS1Q96KK3 526 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 H3BVH4 76 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 UBE2CO00762 179 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 CRXO43186 299 aaPredicted RBP18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 CD7P09564 240 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 DNLZQ5SXM8 178 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 ZNF493Q6ZR52 646 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 ZNF747Q9BV97 191 aa18.2■□□□□ 0.5
TFAP2A-210ENST00000474952 HOXA5P20719 270 aa18.19■□□□□ 0.5
TFAP2A-210ENST00000474952 STHQ8IWL8 128 aa18.19■□□□□ 0.5
TFAP2A-210ENST00000474952 TEP1Q99973 2627 aaKnown RBP18.18■□□□□ 0.5
TFAP2A-210ENST00000474952 TDRG1Q3Y452 100 aa18.18■□□□□ 0.5
TFAP2A-210ENST00000474952 OR10AG1Q8NH19 301 aa18.18■□□□□ 0.5
TFAP2A-210ENST00000474952 C19orf73Q9NVV2 129 aa18.18■□□□□ 0.5
TFAP2A-210ENST00000474952 TENM1Q9UKZ4 2725 aa18.18■□□□□ 0.5
TFAP2A-210ENST00000474952 MED14OSP0DP75 135 aa18.17■□□□□ 0.5
TFAP2A-210ENST00000474952 S100A4P26447 101 aaKnown RBP18.17■□□□□ 0.5
TFAP2A-210ENST00000474952 COA6Q5JTJ3 125 aaKnown RBP18.17■□□□□ 0.5
TFAP2A-210ENST00000474952 TRPT1Q86TN4 253 aaKnown RBP18.17■□□□□ 0.5
TFAP2A-210ENST00000474952 MSRB1Q9NZV6 116 aa18.17■□□□□ 0.5
TFAP2A-210ENST00000474952 SRIP30626 198 aa18.16■□□□□ 0.5
TFAP2A-210ENST00000474952 TIMM8BQ9Y5J9 83 aaPredicted RBP18.16■□□□□ 0.5
TFAP2A-210ENST00000474952 IGHV1OR15-1A0A075B7D0 117 aa18.16■□□□□ 0.5
TFAP2A-210ENST00000474952 RBMY1A1P0DJD3 496 aaKnown RBP18.16■□□□□ 0.5
TFAP2A-210ENST00000474952 RBMY1CP0DJD4 496 aa18.16■□□□□ 0.5
TFAP2A-210ENST00000474952 CACNG7P62955 275 aa18.16■□□□□ 0.5
TFAP2A-210ENST00000474952 RBMY1FQ15415 496 aaKnown RBP18.16■□□□□ 0.5
TFAP2A-210ENST00000474952 IGHV4-4A0A075B6R2 117 aa18.15■□□□□ 0.5
TFAP2A-210ENST00000474952 LOC102724200A0A096LPH7 203 aaPredicted RBP18.15■□□□□ 0.5
TFAP2A-210ENST00000474952 RNASE3P12724 160 aaKnown RBP18.15■□□□□ 0.5
TFAP2A-210ENST00000474952 SCRT2Q9NQ03 307 aa18.15■□□□□ 0.5
TFAP2A-210ENST00000474952 WFDC9Q8NEX5 89 aa18.14■□□□□ 0.49
TFAP2A-210ENST00000474952 ALKBH7Q9BT30 221 aaPredicted RBP18.14■□□□□ 0.49
TFAP2A-210ENST00000474952 ATRQ13535 2644 aa18.13■□□□□ 0.49
TFAP2A-210ENST00000474952 Q0VG73 95 aa18.13■□□□□ 0.49
TFAP2A-210ENST00000474952 SPANXN1Q5VSR9 72 aa18.13■□□□□ 0.49
TFAP2A-210ENST00000474952 MCRIP2Q9BUT9 160 aaKnown RBP18.13■□□□□ 0.49
TFAP2A-210ENST00000474952 WFDC10AQ9H1F0 79 aa18.13■□□□□ 0.49
TFAP2A-210ENST00000474952 TP53TG3Q9ULZ0 132 aa18.13■□□□□ 0.49
TFAP2A-210ENST00000474952 FAM104BQ5XKR9 115 aa18.12■□□□□ 0.49
TFAP2A-210ENST00000474952 C3orf56Q8N813 242 aa18.12■□□□□ 0.49
TFAP2A-210ENST00000474952 TMEM191AQ9H0A3 160 aa18.12■□□□□ 0.49
TFAP2A-210ENST00000474952 AMBPP02760 352 aa18.12■□□□□ 0.49
TFAP2A-210ENST00000474952 HIST3H2BBQ8N257 126 aa18.12■□□□□ 0.49
TFAP2A-210ENST00000474952 OR10J3Q5JRS4 329 aa18.11■□□□□ 0.49
TFAP2A-210ENST00000474952 AMN1Q8IY45 258 aa18.11■□□□□ 0.49
TFAP2A-210ENST00000474952 Q8N1Y9 231 aa18.11■□□□□ 0.49
TFAP2A-210ENST00000474952 PHLDA3Q9Y5J5 127 aa18.11■□□□□ 0.49
TFAP2A-210ENST00000474952 IGHV3-16A0A0C4DH30 117 aa18.1■□□□□ 0.49
TFAP2A-210ENST00000474952 SPRY2O43597 315 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms