RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ZNF256Q9Y2P7 627 aaPredicted RBP3.07□□□□□ -1.92
USP16-205ENST00000474835 KLK5Q9Y337 293 aaPredicted RBP3.07□□□□□ -1.92
USP16-205ENST00000474835 MALRD1Q5VYJ5 2156 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 J3QR89 54 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 TIMM17BO60830 172 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 PLP2Q04941 152 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 SS18Q15532 418 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 ZNF826PQ6ZT77 177 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 OR10J6PQ8NGY7 276 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 MSRB1Q9NZV6 116 aa3.07□□□□□ -1.92
USP16-205ENST00000474835 H3BT86 120 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 IGHV1-69P01742 117 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 TWIST1Q15672 202 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 FAM222AQ5U5X8 452 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 HCP5Q6MZN7 132 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 GUSBP11Q6P575 273 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 OR8A1Q8NGG7 326 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 AP1S3Q96PC3 154 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 TIMM17AQ99595 171 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 FAM173AQ9BQD7 235 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 TTTY12Q9BZ98 90 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 TRAV40A0A0B4J280 105 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 ODF3BA8MYP8 253 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 B5MCH6 92 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 LST1O00453 97 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 MGST1P10620 155 aaKnown RBP3.06□□□□□ -1.92
USP16-205ENST00000474835 PSMB8P28062 276 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 RNASE4P34096 147 aaKnown RBP3.06□□□□□ -1.92
USP16-205ENST00000474835 DEFB133Q30KQ1 61 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 FAM159AQ6UWV7 190 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 Q6ZS52 159 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 EXOC3-AS1Q8N2X6 119 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 NUP37Q8NFH4 326 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 LYSTQ99698 3801 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 SMIM9A6NGZ8 99 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 HOXA3O43365 443 aaPredicted RBP3.06□□□□□ -1.92
USP16-205ENST00000474835 COX7A2P2O60397 106 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 AVPP01185 164 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 TRGV3P03979 118 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 ID1P41134 155 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 NSUN5P1Q3KNT7 163 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 C14orf178Q8N769 122 aaPredicted RBP3.06□□□□□ -1.92
USP16-205ENST00000474835 UBALD1Q8TB05 177 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 RAB37Q96AX2 223 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 RAB9BQ9NP90 201 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 YAE1D1Q9NRH1 226 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 LENEPQ9Y5L5 61 aa3.06□□□□□ -1.92
USP16-205ENST00000474835 PRKDCP78527 4128 aaKnown RBP3.05□□□□□ -1.92
USP16-205ENST00000474835 DNAH7Q8WXX0 4024 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 IGHV3-43A0A0B4J1X8 118 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 NDUFA7O95182 113 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 IGHV3-43DP0DP04 118 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 TMEM155Q4W5P6 130 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 C3orf22Q8N5N4 141 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 KIR2DL5BQ8NHK3 375 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 CCL13Q99616 98 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 CACNA1EQ15878 2313 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 TNCP24821 2201 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 LCE2BO14633 110 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 LAGE3Q14657 143 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 C3AR1Q16581 482 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 TBC1D28Q2M2D7 210 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 FAM180AQ6UWF9 173 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 SMIM2Q9BVW6 85 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 CELSR2Q9HCU4 2923 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 A0A0J9YXY3 114 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 CECR9P0C854 216 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 LEPP41159 167 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 PRR9Q5T870 116 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 PRORYQ9H606 182 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 ZNRD1Q9P1U0 126 aa3.05□□□□□ -1.92
USP16-205ENST00000474835 A0A096LPE4 126 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 LOC107984156A0A0G2JMH3 177 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 A0A1W2PPZ6 126 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 LINC01549A6NIU2 74 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 MRPL33O75394 65 aaKnown RBP3.04□□□□□ -1.92
USP16-205ENST00000474835 LOXP28300 417 aaPredicted RBP3.04□□□□□ -1.92
USP16-205ENST00000474835 TCTAP57738 103 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 TMEM170BQ5T4T1 132 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 TMEM219Q86XT9 240 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 ARL17AQ8IVW1 177 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 SRSF12Q8WXF0 261 aaKnown RBP3.04□□□□□ -1.92
USP16-205ENST00000474835 ANAPC13Q9BS18 74 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 CMYA5Q8N3K9 4069 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 IGHV1-3A0A0C4DH29 117 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 SMKR1H3BMG3 65 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 PLXNB1O43157 2135 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 GATA1P15976 413 aaPredicted RBP3.04□□□□□ -1.92
USP16-205ENST00000474835 ERVK-16P61578 105 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 CEMP1Q6PRD7 247 aaPredicted RBP3.04□□□□□ -1.92
USP16-205ENST00000474835 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 DPH3Q96FX2 82 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 SLC50A1Q9BRV3 221 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 ABCA1O95477 2261 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 ZNF469Q96JG9 3925 aaPredicted RBP3.04□□□□□ -1.92
USP16-205ENST00000474835 GCSHP23434 173 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 PRSS33Q8NF86 280 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 DEFB118Q96PH6 123 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms