RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 BLOC1S1P78537 153 aa9.74□□□□□ -0.85
USF1-205ENST00000473969 TDRG1Q3Y452 100 aa9.74□□□□□ -0.85
USF1-205ENST00000473969 ALKAL2Q6UX46 152 aa9.74□□□□□ -0.85
USF1-205ENST00000473969 Q86TA4 180 aa9.74□□□□□ -0.85
USF1-205ENST00000473969 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
USF1-205ENST00000473969 SPXQ9BT56 116 aa9.74□□□□□ -0.85
USF1-205ENST00000473969 FABP5P3A8MUU1 101 aa9.73□□□□□ -0.85
USF1-205ENST00000473969 SPINK4O60575 86 aa9.73□□□□□ -0.85
USF1-205ENST00000473969 CCL20P78556 96 aa9.73□□□□□ -0.85
USF1-205ENST00000473969 OR5I1Q13606 314 aa9.73□□□□□ -0.85
USF1-205ENST00000473969 LGALS9BQ3B8N2 356 aa9.73□□□□□ -0.85
USF1-205ENST00000473969 LGALS9CQ6DKI2 356 aa9.73□□□□□ -0.85
USF1-205ENST00000473969 Q6ZTI0 123 aa9.73□□□□□ -0.85
USF1-205ENST00000473969 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
USF1-205ENST00000473969 TRBV6-1A0A0K0K1D8 114 aa9.72□□□□□ -0.85
USF1-205ENST00000473969 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
USF1-205ENST00000473969 GNRH2O43555 120 aa9.72□□□□□ -0.85
USF1-205ENST00000473969 TAGLN2P37802 199 aaKnown RBP9.72□□□□□ -0.85
USF1-205ENST00000473969 ZNF80P51504 273 aaPredicted RBP9.72□□□□□ -0.85
USF1-205ENST00000473969 TMEM88Q6PEY1 159 aa9.72□□□□□ -0.85
USF1-205ENST00000473969 LINC00612Q8N6U2 182 aa9.72□□□□□ -0.85
USF1-205ENST00000473969 C15orf53Q8NAA6 179 aa9.72□□□□□ -0.85
USF1-205ENST00000473969 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
USF1-205ENST00000473969 ORM1P02763 201 aa9.71□□□□□ -0.86
USF1-205ENST00000473969 TYMSP04818 313 aa9.71□□□□□ -0.86
USF1-205ENST00000473969 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.86
USF1-205ENST00000473969 BOLA1Q9Y3E2 137 aa9.71□□□□□ -0.86
USF1-205ENST00000473969 IGHV3-16A0A0C4DH30 117 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 PDE6DO43924 150 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 LTAP01374 205 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 P0DMU3 169 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 FAM231AP0DMU4 169 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 FAM231CP0DMU5 169 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 S100A4P26447 101 aaKnown RBP9.7□□□□□ -0.86
USF1-205ENST00000473969 FAM162BQ5T6X4 162 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 BAGE2Q86Y30 109 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 VAX2Q9UIW0 290 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
USF1-205ENST00000473969 M0R2P5 195 aa9.69□□□□□ -0.86
USF1-205ENST00000473969 NUDT3O95989 172 aa9.69□□□□□ -0.86
USF1-205ENST00000473969 BCL2P10415 239 aa9.69□□□□□ -0.86
USF1-205ENST00000473969 MEF2BQ02080 365 aaPredicted RBP9.69□□□□□ -0.86
USF1-205ENST00000473969 UBE2DNLQ8IWF7 75 aa9.69□□□□□ -0.86
USF1-205ENST00000473969 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
USF1-205ENST00000473969 EPPK1P58107 5090 aaKnown RBP9.68□□□□□ -0.86
USF1-205ENST00000473969 B4DEV8 164 aa9.68□□□□□ -0.86
USF1-205ENST00000473969 SH2D1AO60880 128 aa9.68□□□□□ -0.86
USF1-205ENST00000473969 SLAQ13239 276 aa9.68□□□□□ -0.86
USF1-205ENST00000473969 ZC2HC1AQ96GY0 325 aa9.68□□□□□ -0.86
USF1-205ENST00000473969 MED9Q9NWA0 146 aa9.68□□□□□ -0.86
USF1-205ENST00000473969 C11orf21Q9P2W6 132 aa9.68□□□□□ -0.86
USF1-205ENST00000473969 TRAV26-1A0A087WT03 109 aa9.67□□□□□ -0.86
USF1-205ENST00000473969 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
USF1-205ENST00000473969 ASIPP42127 132 aa9.67□□□□□ -0.86
USF1-205ENST00000473969 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
USF1-205ENST00000473969 COX8CQ7Z4L0 72 aa9.67□□□□□ -0.86
USF1-205ENST00000473969 NHLRC2Q8NBF2 726 aa9.67□□□□□ -0.86
USF1-205ENST00000473969 RASL10AQ92737 203 aa9.67□□□□□ -0.86
USF1-205ENST00000473969 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
USF1-205ENST00000473969 TRGV4A0A0C4DH28 118 aa9.66□□□□□ -0.86
USF1-205ENST00000473969 A0A0J9YY99 117 aa9.66□□□□□ -0.86
USF1-205ENST00000473969 C9JCJ5 164 aa9.66□□□□□ -0.86
USF1-205ENST00000473969 M0R036 132 aa9.66□□□□□ -0.86
USF1-205ENST00000473969 OR4C5Q8NGB2 326 aa9.66□□□□□ -0.86
USF1-205ENST00000473969 IGKV3D-20A0A0C4DH25 116 aa9.65□□□□□ -0.86
USF1-205ENST00000473969 HOXA5P20719 270 aa9.65□□□□□ -0.86
USF1-205ENST00000473969 GNG4P50150 75 aa9.65□□□□□ -0.86
USF1-205ENST00000473969 CRIP1P50238 77 aa9.65□□□□□ -0.86
USF1-205ENST00000473969 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
USF1-205ENST00000473969 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
USF1-205ENST00000473969 PRR27Q6MZM9 219 aa9.65□□□□□ -0.86
USF1-205ENST00000473969 PLECQ15149 4684 aaKnown RBP9.64□□□□□ -0.87
USF1-205ENST00000473969 TRAV4A0A0B4J268 109 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 H3BNG1 76 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 PAX4O43316 350 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 MGST1P10620 155 aaKnown RBP9.64□□□□□ -0.87
USF1-205ENST00000473969 CCL18P55774 89 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 DAZAP1Q96EP5 407 aaKnown RBP9.64□□□□□ -0.87
USF1-205ENST00000473969 DERL1Q9BUN8 251 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 BIN3Q9NQY0 253 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
USF1-205ENST00000473969 RYR2Q92736 4967 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 TMSB15BA0A087X1C1 80 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 GRIFINA4D1Z8 144 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 KRBOX1C9JBD0 128 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 RNF212Q495C1 297 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 SYT8Q8NBV8 401 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 SMIM12Q96EX1 92 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 MLST8Q9BVC4 326 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 EIF5A2Q9GZV4 153 aaKnown RBP9.63□□□□□ -0.87
USF1-205ENST00000473969 HHLA3Q9XRX5 114 aa9.63□□□□□ -0.87
USF1-205ENST00000473969 DYNC2H1Q8NCM8 4307 aaKnown RBP9.63□□□□□ -0.87
USF1-205ENST00000473969 RAB19A4D1S5 217 aa9.62□□□□□ -0.87
USF1-205ENST00000473969 H3BVH4 76 aa9.62□□□□□ -0.87
USF1-205ENST00000473969 CIDEAO60543 219 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms