RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 C9orf47Q6ZRZ4 202 aa10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 MRPL53Q96EL3 112 aaKnown RBP10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 HIF1ANQ9NWT6 349 aa10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 TRBV7-3A0A075B6L6 115 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 TRAV12-1A0A0B4J245 112 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 GAGE13Q4V321 117 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 EEF1AKMT3Q96AZ1 226 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 MYMXA0A1B0GTQ4 84 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 G3V318 75 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 MTURNQ8N3F0 131 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 C16orf92Q96LL3 132 aa10.89□□□□□ -0.67
NHLRC3-204ENST00000473371 ORMDL2Q53FV1 153 aa10.88□□□□□ -0.67
NHLRC3-204ENST00000473371 MED13LQ71F56 2210 aa10.88□□□□□ -0.67
NHLRC3-204ENST00000473371 M0R381 172 aa10.88□□□□□ -0.67
NHLRC3-204ENST00000473371 ZFP36P26651 326 aaKnown RBP10.88□□□□□ -0.67
NHLRC3-204ENST00000473371 CYSLTR1Q9Y271 337 aa10.88□□□□□ -0.67
NHLRC3-204ENST00000473371 SPTBN2O15020 2390 aa10.88□□□□□ -0.67
NHLRC3-204ENST00000473371 DCHS2Q6V1P9 2916 aa10.87□□□□□ -0.67
NHLRC3-204ENST00000473371 SPRY2O43597 315 aa10.87□□□□□ -0.67
NHLRC3-204ENST00000473371 CIDEAO60543 219 aa10.87□□□□□ -0.67
NHLRC3-204ENST00000473371 SCGB2A2Q13296 93 aa10.87□□□□□ -0.67
NHLRC3-204ENST00000473371 PRR9Q5T870 116 aa10.87□□□□□ -0.67
NHLRC3-204ENST00000473371 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
NHLRC3-204ENST00000473371 SUMO2P61956 95 aaKnown RBP10.87□□□□□ -0.67
NHLRC3-204ENST00000473371 ZNF292O60281 2723 aa10.87□□□□□ -0.67
NHLRC3-204ENST00000473371 LINC01548A6NM66 108 aa10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 SCGB1A1P11684 91 aa10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 TOMM6Q96B49 74 aa10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 RAXQ9Y2V3 346 aa10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 LINC01619G3V211 115 aa10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 S100A4P26447 101 aaKnown RBP10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 FBXL19-AS1Q494R0 122 aa10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 LCNL1Q6ZST4 164 aa10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 IGF1P05019 195 aa10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 RPL39LQ96EH5 51 aaKnown RBP10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 TLN1Q9Y490 2541 aaKnown RBP10.86□□□□□ -0.67
NHLRC3-204ENST00000473371 TRBV7-1A0A0A6YYK4 115 aa10.85□□□□□ -0.67
NHLRC3-204ENST00000473371 CCL21O00585 134 aa10.85□□□□□ -0.67
NHLRC3-204ENST00000473371 LGALS1P09382 135 aaKnown RBP10.85□□□□□ -0.67
NHLRC3-204ENST00000473371 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
NHLRC3-204ENST00000473371 RASL10AQ92737 203 aa10.85□□□□□ -0.67
NHLRC3-204ENST00000473371 SIRPDQ9H106 197 aa10.85□□□□□ -0.67
NHLRC3-204ENST00000473371 SLC25A16P16260 332 aa10.85□□□□□ -0.67
NHLRC3-204ENST00000473371 ZFHX2Q9C0A1 2572 aaPredicted RBP10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 A0A1B0GWB2 263 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 MGPP08493 103 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 C11orf71Q6IPW1 123 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 C14orf178Q8N769 122 aaPredicted RBP10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 KLK9Q2XQG4 91 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 C2orf66Q6UXQ4 117 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 C20orf78Q9BR46 151 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 DPH3P1Q9H4G8 78 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 U3KQE9 123 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 C20orf173Q96LM9 149 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 PRADC1Q9BSG0 188 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 PRO0461Q9UI25 63 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
NHLRC3-204ENST00000473371 CDSNQ15517 529 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 BAALCQ8WXS3 180 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 SPATA25Q9BR10 227 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 PGPEP1Q9NXJ5 209 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 ZNF815PA8K554 130 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 SAA4P35542 130 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 MORN3Q6PF18 240 aaPredicted RBP10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 SCGB1D4Q6XE38 83 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 LENEPQ9Y5L5 61 aa10.83□□□□□ -0.68
NHLRC3-204ENST00000473371 PRSS29PA6NIE9 313 aa10.82□□□□□ -0.68
NHLRC3-204ENST00000473371 ASIPP42127 132 aa10.82□□□□□ -0.68
NHLRC3-204ENST00000473371 UBE2E1P51965 193 aa10.82□□□□□ -0.68
NHLRC3-204ENST00000473371 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
NHLRC3-204ENST00000473371 INSL3P51460 131 aa10.82□□□□□ -0.68
NHLRC3-204ENST00000473371 OR10J6PQ8NGY7 276 aa10.82□□□□□ -0.68
NHLRC3-204ENST00000473371 LINC00477Q96M19 166 aa10.82□□□□□ -0.68
NHLRC3-204ENST00000473371 NDUFS8O00217 210 aa10.81□□□□□ -0.68
NHLRC3-204ENST00000473371 SRSF9Q13242 221 aaKnown RBP eCLIP10.81□□□□□ -0.68
NHLRC3-204ENST00000473371 ZFAND2AQ8N6M9 145 aa10.81□□□□□ -0.68
NHLRC3-204ENST00000473371 GLMPQ8WWB7 406 aa10.81□□□□□ -0.68
NHLRC3-204ENST00000473371 ITLN2Q8WWU7 325 aaPredicted RBP10.81□□□□□ -0.68
NHLRC3-204ENST00000473371 AJUBAQ96IF1 538 aa10.81□□□□□ -0.68
NHLRC3-204ENST00000473371 SPTA1P02549 2419 aa10.81□□□□□ -0.68
NHLRC3-204ENST00000473371 APOMO95445 188 aa10.8□□□□□ -0.68
NHLRC3-204ENST00000473371 DEFB1P60022 68 aa10.8□□□□□ -0.68
NHLRC3-204ENST00000473371 ANXA2RQ3ZCQ2 193 aa10.8□□□□□ -0.68
NHLRC3-204ENST00000473371 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
NHLRC3-204ENST00000473371 LINC01549A6NIU2 74 aa10.8□□□□□ -0.68
NHLRC3-204ENST00000473371 PLEKHB2Q96CS7 222 aa10.8□□□□□ -0.68
NHLRC3-204ENST00000473371 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
NHLRC3-204ENST00000473371 RNASE4P34096 147 aaKnown RBP10.79□□□□□ -0.68
NHLRC3-204ENST00000473371 SFTA2Q6UW10 78 aa10.79□□□□□ -0.68
NHLRC3-204ENST00000473371 LOC107984156A0A0G2JMH3 177 aa10.79□□□□□ -0.68
NHLRC3-204ENST00000473371 OVOL1O14753 267 aa10.79□□□□□ -0.68
NHLRC3-204ENST00000473371 ARL3P36405 182 aa10.79□□□□□ -0.68
NHLRC3-204ENST00000473371 ARL17AQ8IVW1 177 aa10.79□□□□□ -0.68
NHLRC3-204ENST00000473371 DLX4Q92988 240 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms