RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TNFRSF13BO14836 293 aaPredicted RBP7.87□□□□□ -1.15
APTX-216ENST00000472896 LYZL6O75951 148 aa7.87□□□□□ -1.15
APTX-216ENST00000472896 IGHG4P01861 327 aa7.87□□□□□ -1.15
APTX-216ENST00000472896 ZNF688P0C7X2 276 aa7.87□□□□□ -1.15
APTX-216ENST00000472896 LEPP41159 167 aa7.87□□□□□ -1.15
APTX-216ENST00000472896 PLGLAQ15195 96 aa7.87□□□□□ -1.15
APTX-216ENST00000472896 COX8CQ7Z4L0 72 aa7.87□□□□□ -1.15
APTX-216ENST00000472896 SBSPONQ8IVN8 264 aa7.87□□□□□ -1.15
APTX-216ENST00000472896 RPUSD1Q9UJJ7 312 aaKnown RBP7.87□□□□□ -1.15
APTX-216ENST00000472896 IGHV4-61A0A0C4DH41 118 aa7.86□□□□□ -1.15
APTX-216ENST00000472896 CGB1A6NKQ9 187 aa7.86□□□□□ -1.15
APTX-216ENST00000472896 M0QXV9 152 aa7.86□□□□□ -1.15
APTX-216ENST00000472896 TGFAP01135 160 aa7.86□□□□□ -1.15
APTX-216ENST00000472896 GATA3P23771 443 aa7.86□□□□□ -1.15
APTX-216ENST00000472896 PLNP26678 52 aa7.86□□□□□ -1.15
APTX-216ENST00000472896 SMCPP49901 116 aaPredicted RBP7.86□□□□□ -1.15
APTX-216ENST00000472896 EFNA4P52798 201 aa7.86□□□□□ -1.15
APTX-216ENST00000472896 HOXA4Q00056 320 aaPredicted RBP7.86□□□□□ -1.15
APTX-216ENST00000472896 RPEQ96AT9 228 aa7.86□□□□□ -1.15
APTX-216ENST00000472896 MRPL36Q9P0J6 103 aaKnown RBP7.86□□□□□ -1.15
APTX-216ENST00000472896 TRBV20-1A0A075B6N2 111 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 TMEM213A2RRL7 107 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 IGKV3-15P01624 115 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 IGHV1-2P23083 117 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 CRIP1P50238 77 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 MORN3Q6PF18 240 aaPredicted RBP7.85□□□□□ -1.15
APTX-216ENST00000472896 Q6Q795 121 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 NFE4Q86UQ8 179 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 ZNRF1Q8ND25 227 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 CITED1Q99966 193 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 TPPP3Q9BW30 176 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 UFC1Q9Y3C8 167 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 MGAM2Q2M2H8 2515 aa7.85□□□□□ -1.15
APTX-216ENST00000472896 TRBV19A0A075B6N1 114 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 RHODO00212 210 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 LHBP01229 141 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 TNFRSF1AP19438 455 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 ASIPP42127 132 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 FXYD7P58549 80 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 UTF1Q5T230 341 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 EXOC3-AS1Q8N2X6 119 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 MAPKAPK5-AS1Q8N8E1 139 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 C1orf162Q8NEQ5 155 aaPredicted RBP7.84□□□□□ -1.15
APTX-216ENST00000472896 OR4C13Q8NGP0 309 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 TGP01266 2768 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 ARFGEF3Q5TH69 2177 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 A0A087WX48 190 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 GAGE12JA6NER3 117 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 PRSS29PA6NIE9 313 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 B5MCH6 92 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 GAGE7O76087 117 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 GAGE12FP0CL80 117 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 GAGE12GP0CL81 117 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 GAGE12IP0CL82 117 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 GAGE4Q13068 117 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 VMA21Q3ZAQ7 101 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 SHISA2Q6UWI4 295 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 Q6ZT83 130 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 Q8N8P6 123 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 MYOZ3Q8TDC0 251 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 CARD19Q96LW7 228 aa7.84□□□□□ -1.15
APTX-216ENST00000472896 HEATR1Q9H583 2144 aaKnown RBP7.83□□□□□ -1.16
APTX-216ENST00000472896 IGHV3OR15-7A0A075B7D8 119 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 TRAV12-1A0A0B4J245 112 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 A8MWV9 139 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 E7EUB6 86 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 H3BTX0 84 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 CD40P25942 277 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 UBE2D3P61077 147 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 UBE2D2P62837 147 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 FHL3Q13643 280 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 WFDC3Q8IUB2 231 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 MRPL20Q9BYC9 149 aaKnown RBP7.83□□□□□ -1.16
APTX-216ENST00000472896 SVEP1Q4LDE5 3571 aa7.83□□□□□ -1.16
APTX-216ENST00000472896 TRAV40A0A0B4J280 105 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 SH2D1AO60880 128 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 RBP4P02753 201 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 PPIFP30405 207 aaKnown RBP7.82□□□□□ -1.16
APTX-216ENST00000472896 PSMB2P49721 201 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 HERV-K104P63124 156 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 SIGLEC15Q6ZMC9 328 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 OR11H6Q8NGC7 330 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 RNF185Q96GF1 192 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 SLC25A15Q9Y619 301 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 TANC2Q9HCD6 1990 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 A0A1W2PPI3 338 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 IGLC6P0CF74 106 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 UBE2D1P51668 147 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 LYZP61626 148 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 PDE6HQ13956 83 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 GAGE2EQ4V326 116 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 C3orf56Q8N813 242 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 FAM169BQ8N8A8 192 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 GLMPQ8WWB7 406 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 SHANK2-AS3Q9BTD1 123 aa7.82□□□□□ -1.16
APTX-216ENST00000472896 CNFNQ9BYD5 112 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms