RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ABCA1O95477 2261 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 LAMA5O15230 3695 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 A1L4Q6 167 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 K7EMI3 77 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 DUSP14O95147 198 aaKnown RBP5.77□□□□□ -1.49
CCDC171-205ENST00000472806 TNFRSF6BO95407 300 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 NPYP01303 97 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 PRB4P10163 310 aaPredicted RBP5.77□□□□□ -1.49
CCDC171-205ENST00000472806 IGLL1P15814 213 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 FCER1GP30273 86 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 TSPOP30536 169 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 PRR31Q5SQ13 230 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 SLC25A34Q6PIV7 304 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 ZFAND2AQ8N6M9 145 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 LINC00469Q8N7U9 141 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 Q8N8P6 123 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 OR1N2Q8NGR9 330 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 OR2K2Q8NGT1 345 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 IFI27L1Q96BM0 104 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 DPH3P1Q9H4G8 78 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 PHLDA3Q9Y5J5 127 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 TIMM8BQ9Y5J9 83 aaPredicted RBP5.77□□□□□ -1.49
CCDC171-205ENST00000472806 DCHS1Q96JQ0 3298 aa5.77□□□□□ -1.49
CCDC171-205ENST00000472806 NCOR2Q9Y618 2525 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 MUC21A0A0G2JKD1 596 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 MUC21A0A140T8X8 626 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 LINC01549A6NIU2 74 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 H3BVH4 76 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 M0R381 172 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 TCAPO15273 167 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 ATP5LO75964 103 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 NCR2O95944 276 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 G0S2P27469 103 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 RNASE4P34096 147 aaKnown RBP5.76□□□□□ -1.49
CCDC171-205ENST00000472806 MUC21Q5SSG8 566 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 FAM159AQ6UWV7 190 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 RNF152Q8N8N0 203 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 MYOZ3Q8TDC0 251 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 AP1S3Q96PC3 154 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 BBC3Q96PG8 261 aaPredicted RBP5.76□□□□□ -1.49
CCDC171-205ENST00000472806 GOLT1BQ9Y3E0 138 aa5.76□□□□□ -1.49
CCDC171-205ENST00000472806 SPTBN4Q9H254 2564 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 ADGRG4Q8IZF6 3080 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 KLLNB2CW77 178 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 H0Y8G0 127 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 SMKR1H3BMG3 65 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 SMIM17P0DL12 118 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 SRSF1Q07955 248 aaKnown RBP eCLIP5.75□□□□□ -1.49
CCDC171-205ENST00000472806 BATFQ16520 125 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 LINC00173Q6ZV60 143 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 ZNF575Q86XF7 245 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 Q8N2B8 174 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 Q96MF0 132 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 C20orf78Q9BR46 151 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 ZNF702PQ9H963 129 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 SCRT2Q9NQ03 307 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 MSRB1Q9NZV6 116 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 PEMTQ9UBM1 199 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 CACNA1AO00555 2505 aa5.75□□□□□ -1.49
CCDC171-205ENST00000472806 IGKV3-7A0A075B6H7 116 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 TRAV2A0A0B4J234 112 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 K7EQG2 157 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 HOXA3O43365 443 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-205ENST00000472806 EVI2AP22794 236 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 SCGB2A2Q13296 93 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 LAGE3Q14657 143 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 TMEM95Q3KNT9 176 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 ANXA2RQ3ZCQ2 193 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 C12orf54Q6X4T0 127 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 DCANP1Q8TF63 244 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 NBEAQ8NFP9 2946 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 ABCA2Q9BZC7 2435 aa5.74□□□□□ -1.49
CCDC171-205ENST00000472806 A0A096LNJ9 63 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 hDV102S1A0JD36 115 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 C7orf71A4D174 169 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 J3KRW8 73 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 NXPH4O95158 308 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 COX8AP10176 69 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 MAJINQ3KP22 176 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 PRR9Q5T870 116 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 FOXI2Q6ZQN5 318 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 NRACQ8N912 160 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 PKD1L2Q7Z442 2459 aa5.73□□□□□ -1.49
CCDC171-205ENST00000472806 HRNRQ86YZ3 2850 aaPredicted RBP5.73□□□□□ -1.49
CCDC171-205ENST00000472806 PIEZO1Q92508 2521 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 IGHV4OR15-8A0A075B7B6 117 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 A0A087WW49 117 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 A0A0J9YX75 114 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 LINC01619G3V211 115 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 SIVA1O15304 175 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 DLEU1O43261 78 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 PRSS1P07477 247 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 HOXD3P31249 432 aaPredicted RBP5.72□□□□□ -1.49
CCDC171-205ENST00000472806 SYNJ2BPP57105 145 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 SUMO2P61956 95 aaKnown RBP5.72□□□□□ -1.49
CCDC171-205ENST00000472806 RPL32P62910 135 aaKnown RBP5.72□□□□□ -1.49
CCDC171-205ENST00000472806 GAGE1Q13065 139 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms