RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TRAV36DV7A0A075B6V5 113 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 A0A096LNT2 108 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 TRDV1A0A1B0GX56 115 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 A0A1W2PNN7 141 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 PRB4P10163 310 aaPredicted RBP1.48□□□□□ -2.17
XRN1-210ENST00000472697 GPX2P18283 190 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 XCL1P47992 114 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 SPINT3P49223 89 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 DYNLT1P63172 113 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 TMEM244Q5VVB8 128 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 LCN15Q6UWW0 184 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 Q8IYB0 196 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 LCN9Q8WX39 176 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 AQP3Q92482 292 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 TEX37Q96LM6 180 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 OR2J1Q9GZK6 312 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 OSTCQ9NRP0 149 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 HSPB8Q9UJY1 196 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 BOKQ9UMX3 212 aaPredicted RBP1.48□□□□□ -2.17
XRN1-210ENST00000472697 FAM215AQ9Y5M1 114 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 MAP1AP78559 2803 aaPredicted RBP1.48□□□□□ -2.17
XRN1-210ENST00000472697 NINQ8N4C6 2090 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 TACC2O95359 2948 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 A0A0J9YX75 114 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 LCE6AA0A183 80 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 A0A1B0GU33 70 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 A0A1B0GV50 99 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 DEFB108AA8MXU0 73 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 C9JAW5 83 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 UBBP0CG47 229 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 GZMBP10144 247 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 FABP2P12104 132 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 ZNF14P17017 642 aaPredicted RBP1.47□□□□□ -2.17
XRN1-210ENST00000472697 MT3P25713 68 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 SRP14P37108 136 aaKnown RBP1.47□□□□□ -2.17
XRN1-210ENST00000472697 CCL20P78556 96 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 HMGN2P46Q86SG4 172 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 OR2T10Q8NGZ9 312 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 NAT8BQ9UHF3 227 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 HIGD1AQ9Y241 93 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 TRBV19A0A075B6N1 114 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 MEIKINA0A087WXM9 373 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 TRGV5A0A0B4J1U4 118 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 TRAV38-1A0A0B4J264 116 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 GNG7O60262 68 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 CLPSP04118 112 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 PLGLB1Q02325 96 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 RRN3P1Q2M238 152 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 RPS19BP1Q86WX3 136 aaKnown RBP1.47□□□□□ -2.17
XRN1-210ENST00000472697 PLPP5Q8NEB5 264 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 SLC25A21Q9BQT8 299 aaPredicted RBP1.47□□□□□ -2.17
XRN1-210ENST00000472697 OR2H1Q9GZK4 316 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 TRAPPC1Q9Y5R8 145 aa1.47□□□□□ -2.17
XRN1-210ENST00000472697 MDC1Q14676 2089 aaKnown RBP1.46□□□□□ -2.18
XRN1-210ENST00000472697 ABCA1O95477 2261 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 AKAP6Q13023 2319 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 J3KT08 172 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 KDELR1P24390 212 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 ATP6V0CP27449 155 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 ZNF117Q03924 483 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 Q6ZQT7 251 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 BPIFB6Q8NFQ5 453 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 ANAPC11Q9NYG5 84 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 WNK1Q9H4A3 2382 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 DCHS2Q6V1P9 2916 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 LINC00694P0DN24 101 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 MPV17P39210 176 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 FOXA3P55318 350 aaPredicted RBP1.46□□□□□ -2.18
XRN1-210ENST00000472697 MIAQ16674 131 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 CCSMST1Q4G0I0 132 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.46□□□□□ -2.184e-7■■■■□ 21.3
XRN1-210ENST00000472697 HIST3H2BBQ8N257 126 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 TMEM229BQ8NBD8 167 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 C10orf105Q8TEF2 133 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 LINC00167Q96N53 147 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 SCRT1Q9BWW7 348 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 BAIAP2Q9UQB8 552 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 ZANQ9Y493 2812 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 FREM3P0C091 2139 aa1.46□□□□□ -2.18
XRN1-210ENST00000472697 IGKV2D-24A0A075B6R9 120 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 LOC100130705A0A1B0GUX0 176 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 RTL8CO15255 209 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 GNRH2O43555 120 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 OGNP20774 298 aaKnown RBP1.45□□□□□ -2.18
XRN1-210ENST00000472697 EFNA4P52798 201 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 BIKQ13323 160 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 RPL22L1Q6P5R6 122 aaKnown RBP1.45□□□□□ -2.18
XRN1-210ENST00000472697 LRRC28Q86X40 367 aaPredicted RBP1.45□□□□□ -2.18
XRN1-210ENST00000472697 C3orf22Q8N5N4 141 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 C9orf163Q8N9P6 203 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 OR4C16Q8NGL9 310 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 OR9Q1Q8NGQ5 310 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 NPCDR1Q9BY65 106 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 TTTY12Q9BZ98 90 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 SMDT1Q9H4I9 107 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 CBLN4Q9NTU7 201 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 SLC39A9Q9NUM3 307 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 CSMD1Q96PZ7 3565 aa1.45□□□□□ -2.18
XRN1-210ENST00000472697 FAM236AA0A1B0GUQ0 79 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms