RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 AKR1C8PQ5T2L2 129 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 SH3BGRL3Q9H299 93 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 LRTM1Q9HBL6 345 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 TCOF1Q13428 1488 aaKnown RBP-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 TANC2Q9HCD6 1990 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 NINQ8N4C6 2090 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 LTC4SQ16873 150 aa-1.4□□□□□ -2.63
PRPF40A-207ENST00000471701 NUP35Q8NFH5 326 aa-1.4□□□□□ -2.63
PRPF40A-207ENST00000471701 TMEM141Q96I45 108 aa-1.4□□□□□ -2.63
PRPF40A-207ENST00000471701 PRELID3AQ96N28 172 aa-1.4□□□□□ -2.63
PRPF40A-207ENST00000471701 NHSL1Q5SYE7 1610 aa-1.4□□□□□ -2.63
PRPF40A-207ENST00000471701 H3BQV1 296 aa-1.41□□□□□ -2.64
PRPF40A-207ENST00000471701 GLRXP35754 106 aa-1.41□□□□□ -2.64
PRPF40A-207ENST00000471701 GTF2A1P52655 376 aaPredicted RBP-1.41□□□□□ -2.64
PRPF40A-207ENST00000471701 ELOF1P60002 83 aaKnown RBP-1.41□□□□□ -2.64
PRPF40A-207ENST00000471701 DEFB109BQ30KR1 87 aa-1.41□□□□□ -2.64
PRPF40A-207ENST00000471701 COA4Q9NYJ1 87 aa-1.41□□□□□ -2.64
PRPF40A-207ENST00000471701 MYH2Q9UKX2 1941 aa-1.41□□□□□ -2.64
PRPF40A-207ENST00000471701 BIVM-ERCC5R4GMW8 1640 aa-1.41□□□□□ -2.64
PRPF40A-207ENST00000471701 IFITM5A6NNB3 132 aa-1.42□□□□□ -2.64
PRPF40A-207ENST00000471701 IFNA6P05013 189 aa-1.42□□□□□ -2.64
PRPF40A-207ENST00000471701 CTXN2P0C2S0 81 aa-1.42□□□□□ -2.64
PRPF40A-207ENST00000471701 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.42□□□□□ -2.64
PRPF40A-207ENST00000471701 SPTBN2O15020 2390 aa-1.42□□□□□ -2.64
PRPF40A-207ENST00000471701 TECPR2O15040 1411 aa-1.42□□□□□ -2.64
PRPF40A-207ENST00000471701 LOC107986453A0A1B0GWG9 222 aa-1.43□□□□□ -2.64
PRPF40A-207ENST00000471701 MFSD11O43934 449 aa-1.43□□□□□ -2.64
PRPF40A-207ENST00000471701 ARF6P62330 175 aa-1.43□□□□□ -2.64
PRPF40A-207ENST00000471701 CROCCP2Q86T23 111 aa-1.43□□□□□ -2.64
PRPF40A-207ENST00000471701 SMIM11BQ8TCY0 68 aa-1.43□□□□□ -2.64
PRPF40A-207ENST00000471701 GINS3Q9BRX5 216 aa-1.43□□□□□ -2.64
PRPF40A-207ENST00000471701 SPAG17Q6Q759 2223 aa-1.43□□□□□ -2.64
PRPF40A-207ENST00000471701 APC2O95996 2303 aa-1.44□□□□□ -2.64
PRPF40A-207ENST00000471701 TEX49A0A1B0GTD5 131 aa-1.44□□□□□ -2.64
PRPF40A-207ENST00000471701 GABARAPH6UMI1 98 aa-1.44□□□□□ -2.64
PRPF40A-207ENST00000471701 TFF1P04155 84 aa-1.44□□□□□ -2.64
PRPF40A-207ENST00000471701 UNQ5815/PRO19632Q6UWF5 114 aa-1.44□□□□□ -2.64
PRPF40A-207ENST00000471701 FAM135BQ49AJ0 1406 aa-1.44□□□□□ -2.64
PRPF40A-207ENST00000471701 TRAV12-2A0A075B6T6 113 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 TRBV10-1A0A0K0K1A3 114 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 TRDV1A0A1B0GX56 115 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 SLC25A4P12235 298 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 RPL19P84098 196 aaKnown RBP-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 TEX29Q8N6K0 151 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 SMIM7Q9BQ49 75 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 CYP4F30PQ9H0H9 118 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 BET1LQ9NYM9 111 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 PKDREJQ9NTG1 2253 aa-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 MAP1BP46821 2468 aaKnown RBP-1.45□□□□□ -2.64
PRPF40A-207ENST00000471701 NUP210Q8TEM1 1887 aaPredicted RBP-1.46□□□□□ -2.64
PRPF40A-207ENST00000471701 SDC4P31431 198 aa-1.46□□□□□ -2.64
PRPF40A-207ENST00000471701 WFDC2Q14508 124 aa-1.46□□□□□ -2.64
PRPF40A-207ENST00000471701 DHRS4L2Q6PKH6 230 aa-1.46□□□□□ -2.64
PRPF40A-207ENST00000471701 OR51A4Q8NGJ6 313 aa-1.46□□□□□ -2.64
PRPF40A-207ENST00000471701 PARVGQ9HBI0 331 aa-1.46□□□□□ -2.64
PRPF40A-207ENST00000471701 HELZP42694 1942 aaKnown RBP-1.46□□□□□ -2.64
PRPF40A-207ENST00000471701 WDR97A6NE52 1622 aa-1.47□□□□□ -2.64
PRPF40A-207ENST00000471701 HERC1Q15751 4861 aa-1.47□□□□□ -2.64
PRPF40A-207ENST00000471701 PTPRGP23470 1445 aa-1.47□□□□□ -2.64
PRPF40A-207ENST00000471701 ZNF670-ZNF695F2Z2N8 137 aa-1.47□□□□□ -2.64
PRPF40A-207ENST00000471701 APODP05090 189 aa-1.47□□□□□ -2.64
PRPF40A-207ENST00000471701 BLCAPP62952 87 aa-1.47□□□□□ -2.64
PRPF40A-207ENST00000471701 SPAG11BQ08648 103 aa-1.47□□□□□ -2.64
PRPF40A-207ENST00000471701 OR13C6PQ8NH95 151 aa-1.47□□□□□ -2.64
PRPF40A-207ENST00000471701 KIDINS220Q9ULH0 1771 aa-1.47□□□□□ -2.65
PRPF40A-207ENST00000471701 PIEZO2Q9H5I5 2752 aa-1.47□□□□□ -2.65
PRPF40A-207ENST00000471701 PPRC1Q5VV67 1664 aaKnown RBP-1.48□□□□□ -2.65
PRPF40A-207ENST00000471701 A0A087WTM6 91 aa-1.48□□□□□ -2.65
PRPF40A-207ENST00000471701 M0R3E3 92 aa-1.48□□□□□ -2.65
PRPF40A-207ENST00000471701 OR2H2O95918 312 aa-1.48□□□□□ -2.65
PRPF40A-207ENST00000471701 SDC2P34741 201 aa-1.48□□□□□ -2.65
PRPF40A-207ENST00000471701 MED11Q9P086 117 aa-1.48□□□□□ -2.65
PRPF40A-207ENST00000471701 MYH1P12882 1939 aa-1.48□□□□□ -2.65
PRPF40A-207ENST00000471701 TRAV17A0A0B4J275 112 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 TRBV27A0A0K0K1C4 114 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 ADCYAP1P18509 176 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 POLR2JP52435 117 aaKnown RBP-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 REEP5Q00765 189 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 FADDQ13158 208 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 MORN4Q8NDC4 146 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 PPP1R1CQ8WVI7 109 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 PRO0255Q9UI72 69 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 NUBP2Q9Y5Y2 271 aa-1.49□□□□□ -2.65
PRPF40A-207ENST00000471701 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 TMEM210A6NLX4 147 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 ZNF815PA8K554 130 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 IFNA1P01562 189 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 BASP1P80723 227 aaKnown RBP-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 SSBP3-AS1Q7Z2R9 100 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 LINC00305Q7Z4B0 112 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 OTOSQ8NHW6 89 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 AP3S1Q92572 193 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 CEP19Q96LK0 163 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 TMEM242Q9NWH2 141 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 KMT2CQ8NEZ4 4911 aaKnown RBP-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 MYH3P11055 1940 aa-1.5□□□□□ -2.65
PRPF40A-207ENST00000471701 NBEAL1Q6ZS30 2694 aa-1.51□□□□□ -2.65
PRPF40A-207ENST00000471701 COX4I1P13073 169 aa-1.51□□□□□ -2.65
PRPF40A-207ENST00000471701 HSD11B1P28845 292 aa-1.51□□□□□ -2.65
PRPF40A-207ENST00000471701 TAS2R41P59536 307 aa-1.51□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms