RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 SCRT1Q9BWW7 348 aa3.59□□□□□ -1.83
NF1-208ENST00000471572 TTTY12Q9BZ98 90 aa3.59□□□□□ -1.83
NF1-208ENST00000471572 MRPL16Q9NX20 251 aaKnown RBP3.59□□□□□ -1.83
NF1-208ENST00000471572 R4GN34 69 aa3.59□□□□□ -1.83
NF1-208ENST00000471572 ZFHX4Q86UP3 3567 aa3.59□□□□□ -1.83
NF1-208ENST00000471572 HEATR5AQ86XA9 2040 aa3.59□□□□□ -1.84
NF1-208ENST00000471572 LOC400499M0QZD8 3231 aa3.59□□□□□ -1.84
NF1-208ENST00000471572 SHANK1Q9Y566 2161 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 TRGV5A0A0B4J1U4 118 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 TRAV5A0A0B4J249 113 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 GGCTO75223 188 aaKnown RBP3.58□□□□□ -1.84
NF1-208ENST00000471572 PLGLB1Q02325 96 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 NDUFA5Q16718 116 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 VMA21Q3ZAQ7 101 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 PHF5AQ7RTV0 110 aaKnown RBP3.58□□□□□ -1.84
NF1-208ENST00000471572 DPY30Q9C005 99 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 ANAPC11Q9NYG5 84 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 FAM215AQ9Y5M1 114 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 CPAMD8Q8IZJ3 1885 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 C3orf84H3BNL1 204 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 C19orf84I3L1E1 186 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 FABP2P12104 132 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 S100A3P33764 101 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 SDC2P34741 201 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 DSCR4P56555 118 aaPredicted RBP3.58□□□□□ -1.84
NF1-208ENST00000471572 TMEM244Q5VVB8 128 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 C10orf126Q8N4M7 172 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 TAF9BQ9HBM6 251 aa3.58□□□□□ -1.84
NF1-208ENST00000471572 USP9XQ93008 2570 aaPredicted RBP3.58□□□□□ -1.84
NF1-208ENST00000471572 GCN1Q92616 2671 aaKnown RBP3.57□□□□□ -1.84
NF1-208ENST00000471572 CELSR3Q9NYQ7 3312 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 WDFY3Q8IZQ1 3526 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 PRR14LQ5THK1 2151 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 FLNBO75369 2602 aaKnown RBP3.57□□□□□ -1.84
NF1-208ENST00000471572 A0A0G2JMM0 328 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 A0A1W2PPB8 328 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 A0A1W2PRS3 328 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 KIR3DP1A8MWS1 328 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 CST7O76096 145 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 EVI2AP22794 236 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 HBBP68871 147 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 SOSTDC1Q6X4U4 206 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 LPAR5Q9H1C0 372 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 CBLN4Q9NTU7 201 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 ARID1AO14497 2285 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 BSNQ9UPA5 3926 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 USP9YO00507 2555 aaPredicted RBP3.57□□□□□ -1.84
NF1-208ENST00000471572 HIVEP3Q5T1R4 2406 aa3.57□□□□□ -1.84
NF1-208ENST00000471572 EDF1O60869 148 aaKnown RBP3.56□□□□□ -1.84
NF1-208ENST00000471572 DPM2O94777 84 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 HMGN2P05204 90 aaKnown RBP3.56□□□□□ -1.84
NF1-208ENST00000471572 RRAS2P62070 204 aaPredicted RBP3.56□□□□□ -1.84
NF1-208ENST00000471572 GLYATL3Q5SZD4 288 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 PDZD9Q8IXQ8 264 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 DYNAPQ8N1N2 210 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 TEX29Q8N6K0 151 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 SDF2Q99470 211 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 CALML5Q9NZT1 146 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 FLNCQ14315 2725 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 EML6Q6ZMW3 1958 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 TMEM235A6NFC5 223 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 CREBL2O60519 120 aaPredicted RBP3.56□□□□□ -1.84
NF1-208ENST00000471572 UCHL1P09936 223 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 RAB5CP51148 216 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 POLR2JP52435 117 aaKnown RBP3.56□□□□□ -1.84
NF1-208ENST00000471572 LYZL1Q6UWQ5 148 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 TMEM14EPQ6UXP3 125 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 LINC00305Q7Z4B0 112 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 GINS4Q9BRT9 223 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 PRADC1Q9BSG0 188 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 ADAT1Q9BUB4 502 aaKnown RBP3.56□□□□□ -1.84
NF1-208ENST00000471572 NPCDR1Q9BY65 106 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 TXNL4BQ9NX01 149 aaKnown RBP3.56□□□□□ -1.84
NF1-208ENST00000471572 OR5AC2Q9NZP5 309 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 ERG28Q9UKR5 140 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 BAIAP2Q9UQB8 552 aa3.56□□□□□ -1.84
NF1-208ENST00000471572 ASH1LQ9NR48 2969 aaKnown RBP3.56□□□□□ -1.84
NF1-208ENST00000471572 PTPN13Q12923 2485 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 SPTAN1Q13813 2472 aaKnown RBP3.55□□□□□ -1.84
NF1-208ENST00000471572 BOD1L1Q8NFC6 3051 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 IGLV3-9A0A075B6K5 115 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 TRAV7A0A075B6U4 112 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 IGHV1-58A0A0C4DH39 117 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 TRBV7-6A0A0J9YX20 115 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 MEIS3P1A6NDR6 274 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 F8W036 122 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 SLC22A1O15245 554 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 GNRH2O43555 120 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 ZNF14P17017 642 aaPredicted RBP3.55□□□□□ -1.84
NF1-208ENST00000471572 MOBPQ13875 183 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 RNF182Q8N6D2 247 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 BRK1Q8WUW1 75 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 BCL2L10Q9HD36 194 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 KLK12Q9UKR0 248 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 SPTBN1Q01082 2364 aaKnown RBP3.55□□□□□ -1.84
NF1-208ENST00000471572 PRRC2CQ9Y520 2896 aaKnown RBP3.55□□□□□ -1.84
NF1-208ENST00000471572 TENM4Q6N022 2769 aa3.55□□□□□ -1.84
NF1-208ENST00000471572 SMG1Q96Q15 3661 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms