RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SNX29P2Q8IUI4 249 aa2.29□□□□□ -2.04
SMC5-202ENST00000471372 MYO18AQ92614 2054 aaKnown RBP2.29□□□□□ -2.04
SMC5-202ENST00000471372 PHRF1Q9P1Y6 1649 aaKnown RBP2.28□□□□□ -2.04
SMC5-202ENST00000471372 TRBV20-1A0A075B6N2 111 aa2.28□□□□□ -2.04
SMC5-202ENST00000471372 ZNF670-ZNF695F2Z2N8 137 aa2.28□□□□□ -2.04
SMC5-202ENST00000471372 IL7P13232 177 aa2.28□□□□□ -2.04
SMC5-202ENST00000471372 SPATA45Q537H7 98 aa2.28□□□□□ -2.04
SMC5-202ENST00000471372 OCIAD2Q56VL3 154 aa2.28□□□□□ -2.04
SMC5-202ENST00000471372 HELZP42694 1942 aaKnown RBP2.28□□□□□ -2.04
SMC5-202ENST00000471372 RP1L1Q8IWN7 2480 aaPredicted RBP2.27□□□□□ -2.05
SMC5-202ENST00000471372 ANK1P16157 1881 aa2.27□□□□□ -2.05
SMC5-202ENST00000471372 IGKCP01834 107 aa2.27□□□□□ -2.05
SMC5-202ENST00000471372 PDE6GP18545 87 aa2.27□□□□□ -2.05
SMC5-202ENST00000471372 NOP16Q9Y3C1 178 aaKnown RBP2.27□□□□□ -2.05
SMC5-202ENST00000471372 C22orf24Q9Y442 160 aa2.27□□□□□ -2.05
SMC5-202ENST00000471372 PTPRGP23470 1445 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 K7EP13 123 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 M0R2P5 195 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 YPEL1O60688 119 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 ANGP03950 147 aaKnown RBP2.26□□□□□ -2.05
SMC5-202ENST00000471372 PRB4P10163 310 aaPredicted RBP2.26□□□□□ -2.05
SMC5-202ENST00000471372 KRTAP21-3Q3LHN1 58 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 SLC25A26Q70HW3 274 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 ATP6V0E2Q8NHE4 81 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 TRPM7Q96QT4 1865 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 ERCC6Q03468 1493 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 KIDINS220Q9ULH0 1771 aa2.26□□□□□ -2.05
SMC5-202ENST00000471372 E9PCH4 1651 aa2.25□□□□□ -2.05
SMC5-202ENST00000471372 PTPRDP23468 1912 aa2.25□□□□□ -2.05
SMC5-202ENST00000471372 TECTAO75443 2155 aa2.25□□□□□ -2.05
SMC5-202ENST00000471372 TMEM30CPA0ZSE6 113 aa2.25□□□□□ -2.05
SMC5-202ENST00000471372 IGF2P01344 180 aa2.25□□□□□ -2.05
SMC5-202ENST00000471372 RHOHQ15669 191 aa2.25□□□□□ -2.05
SMC5-202ENST00000471372 ATP11AUNQ6ZP68 121 aa2.25□□□□□ -2.05
SMC5-202ENST00000471372 SBSPONQ8IVN8 264 aa2.25□□□□□ -2.05
SMC5-202ENST00000471372 IGHV3-30P01768 117 aa2.24□□□□□ -2.05
SMC5-202ENST00000471372 IGHV3-30-5P0DP03 117 aa2.24□□□□□ -2.05
SMC5-202ENST00000471372 LYPD5Q6UWN5 251 aa2.24□□□□□ -2.05
SMC5-202ENST00000471372 NUPR2A6NF83 97 aa2.23□□□□□ -2.05
SMC5-202ENST00000471372 FXYD4P59646 89 aa2.23□□□□□ -2.05
SMC5-202ENST00000471372 IQCJQ1A5X6 159 aa2.23□□□□□ -2.05
SMC5-202ENST00000471372 BOKQ9UMX3 212 aaPredicted RBP2.23□□□□□ -2.05
SMC5-202ENST00000471372 LRP5O75197 1615 aa2.23□□□□□ -2.05
SMC5-202ENST00000471372 TET1Q8NFU7 2136 aa2.23□□□□□ -2.05
SMC5-202ENST00000471372 TRAV17A0A0B4J275 112 aa2.22□□□□□ -2.05
SMC5-202ENST00000471372 RPL37AP61513 92 aaKnown RBP2.22□□□□□ -2.05
SMC5-202ENST00000471372 MIC13Q5XKP0 118 aa2.22□□□□□ -2.05
SMC5-202ENST00000471372 SAR1AQ9NR31 198 aa2.22□□□□□ -2.05
SMC5-202ENST00000471372 TAS2R8Q9NYW2 309 aa2.22□□□□□ -2.05
SMC5-202ENST00000471372 MRPL36Q9P0J6 103 aaKnown RBP2.22□□□□□ -2.05
SMC5-202ENST00000471372 NCOA6Q14686 2063 aaPredicted RBP2.22□□□□□ -2.05
SMC5-202ENST00000471372 EML5Q05BV3 1969 aa2.21□□□□□ -2.05
SMC5-202ENST00000471372 UHRF1BP1LA0JNW5 1464 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 A0A0G2JMM0 328 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 EFCAB10A6NFE3 127 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 J3QLW9 94 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 GNG7O60262 68 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 TPST1O60507 370 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 PITX3O75364 302 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 GYPBP06028 91 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 POLR2JP52435 117 aaKnown RBP2.21□□□□□ -2.06
SMC5-202ENST00000471372 AMELYQ99218 206 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 SDF2Q99470 211 aa2.21□□□□□ -2.06
SMC5-202ENST00000471372 PRRC2BQ5JSZ5 2229 aaKnown RBP2.2□□□□□ -2.06
SMC5-202ENST00000471372 NCR3O14931 201 aa2.2□□□□□ -2.06
SMC5-202ENST00000471372 TFF1P04155 84 aa2.2□□□□□ -2.06
SMC5-202ENST00000471372 CTTNBP2Q8WZ74 1663 aa2.2□□□□□ -2.06
SMC5-202ENST00000471372 IBTKQ9P2D0 1353 aaPredicted RBP2.2□□□□□ -2.06
SMC5-202ENST00000471372 RRAS2P62070 204 aaPredicted RBP2.19□□□□□ -2.06
SMC5-202ENST00000471372 UNQ5815/PRO19632Q6UWF5 114 aa2.19□□□□□ -2.06
SMC5-202ENST00000471372 ATOH7Q8N100 152 aa2.19□□□□□ -2.06
SMC5-202ENST00000471372 DYNLRB2Q8TF09 96 aa2.19□□□□□ -2.06
SMC5-202ENST00000471372 ARL11Q969Q4 196 aa2.19□□□□□ -2.06
SMC5-202ENST00000471372 LINC00470Q9BZP3 86 aa2.19□□□□□ -2.06
SMC5-202ENST00000471372 EFNA4P52798 201 aa2.18□□□□□ -2.06
SMC5-202ENST00000471372 SELENOWP63302 87 aa2.18□□□□□ -2.06
SMC5-202ENST00000471372 Q6ZUT4 128 aa2.18□□□□□ -2.06
SMC5-202ENST00000471372 PEAK1Q9H792 1746 aa2.17□□□□□ -2.06
SMC5-202ENST00000471372 DLG5Q8TDM6 1919 aa2.17□□□□□ -2.06
SMC5-202ENST00000471372 PYYP10082 97 aa2.17□□□□□ -2.06
SMC5-202ENST00000471372 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
SMC5-202ENST00000471372 RPL13AP3Q6NVV1 102 aa2.17□□□□□ -2.06
SMC5-202ENST00000471372 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
SMC5-202ENST00000471372 TMEM191AQ9H0A3 160 aa2.16□□□□□ -2.06
SMC5-202ENST00000471372 ATG5Q9H1Y0 275 aa2.16□□□□□ -2.06
SMC5-202ENST00000471372 MYH13Q9UKX3 1938 aa2.16□□□□□ -2.06
SMC5-202ENST00000471372 FLG2Q5D862 2391 aaPredicted RBP2.16□□□□□ -2.06
SMC5-202ENST00000471372 EMX2Q04743 252 aa2.15□□□□□ -2.07
SMC5-202ENST00000471372 PPDPFLQ8WWR9 84 aa2.15□□□□□ -2.07
SMC5-202ENST00000471372 CASZ1Q86V15 1759 aa2.15□□□□□ -2.07
SMC5-202ENST00000471372 CXorf51AA0A1B0GTR3 108 aa2.14□□□□□ -2.07
SMC5-202ENST00000471372 PSMG3Q9BT73 122 aaPredicted RBP2.14□□□□□ -2.07
SMC5-202ENST00000471372 NINQ8N4C6 2090 aa2.14□□□□□ -2.07
SMC5-202ENST00000471372 ADGRB1O14514 1584 aa2.14□□□□□ -2.07
SMC5-202ENST00000471372 GRIN2AQ12879 1464 aa2.14□□□□□ -2.07
SMC5-202ENST00000471372 MUC6Q6W4X9 2439 aa2.13□□□□□ -2.07
SMC5-202ENST00000471372 MYH6P13533 1939 aa2.13□□□□□ -2.07
SMC5-202ENST00000471372 TRAV2A0A0B4J234 112 aa2.13□□□□□ -2.07
SMC5-202ENST00000471372 A0A1B0GV90 55 aa2.13□□□□□ -2.07
SMC5-202ENST00000471372 FAM25AB3EWG3 89 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms