RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SFRP2Q96HF1 295 aa8.12□□□□□ -1.11
SREBF1-209ENST00000470247 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
SREBF1-209ENST00000470247 NEU1Q99519 415 aa8.12□□□□□ -1.11
SREBF1-209ENST00000470247 B9D2Q9BPU9 175 aa8.12□□□□□ -1.11
SREBF1-209ENST00000470247 TP53TG1Q9Y2A0 90 aa8.12□□□□□ -1.11
SREBF1-209ENST00000470247 DNAH9Q9NYC9 4486 aa8.12□□□□□ -1.11
SREBF1-209ENST00000470247 HUWE1Q7Z6Z7 4374 aaKnown RBP8.11□□□□□ -1.11
SREBF1-209ENST00000470247 PLAC8L1A1L4L8 177 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 M0R036 132 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 ORM1P02763 201 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 TYMSP04818 313 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 ERVFC1-1P60608 527 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 IBA57Q5T440 356 aaKnown RBP8.11□□□□□ -1.11
SREBF1-209ENST00000470247 OR11H2Q8NH07 326 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 NAGKQ9UJ70 344 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 V9GYV3 84 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 NBEAL2Q6ZNJ1 2754 aa8.11□□□□□ -1.11
SREBF1-209ENST00000470247 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
SREBF1-209ENST00000470247 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 TMEM189A5PLL7 270 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 P01737 135 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 APOC3P02656 99 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 RNF212Q495C1 297 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 FAM159AQ6UWV7 190 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 C11orf72Q8NBR9 251 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 CLRN3Q8NCR9 226 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 OR2D3Q8NGH3 330 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 OR10G8Q8NGN5 311 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 RNASE8Q8TDE3 154 aaKnown RBP8.1□□□□□ -1.11
SREBF1-209ENST00000470247 DAZAP1Q96EP5 407 aaKnown RBP8.1□□□□□ -1.11
SREBF1-209ENST00000470247 TMEM208Q9BTX3 173 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
SREBF1-209ENST00000470247 TMSB15BA0A087X1C1 80 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 GRIFINA4D1Z8 144 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 SMIM9A6NGZ8 99 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 B4DEV8 164 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 GATCO43716 136 aaKnown RBP8.09□□□□□ -1.11
SREBF1-209ENST00000470247 CXCL1P09341 107 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 GZMBP10144 247 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 RNASE3P12724 160 aaKnown RBP8.09□□□□□ -1.11
SREBF1-209ENST00000470247 HTN1P15515 57 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 Q8NAQ8 132 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 KCNS1Q96KK3 526 aa8.09□□□□□ -1.11
SREBF1-209ENST00000470247 RPP21Q9H633 154 aaKnown RBP8.09□□□□□ -1.11
SREBF1-209ENST00000470247 C7orf77A4D0Y5 90 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 CBY3A6NI87 242 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 IGLC6P0CF74 106 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 RRN3P1Q2M238 152 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 CT83Q5H943 113 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 ATRAIDQ6UW56 229 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 C15orf54Q8N8G6 183 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 IL17DQ8TAD2 202 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 TMEM263Q8WUH6 116 aaKnown RBP8.08□□□□□ -1.12
SREBF1-209ENST00000470247 GTSF1Q8WW33 167 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 C9orf85Q96MD7 179 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 SPATA25Q9BR10 227 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 SSBP4Q9BWG4 385 aaPredicted RBP8.08□□□□□ -1.12
SREBF1-209ENST00000470247 SCRT2Q9NQ03 307 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 GSN-AS1Q9NRJ2 163 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 TENM3Q9P273 2699 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
SREBF1-209ENST00000470247 IGHV4-28A0A0C4DH34 117 aa8.07□□□□□ -1.12
SREBF1-209ENST00000470247 ATP6V1G1O75348 118 aa8.07□□□□□ -1.12
SREBF1-209ENST00000470247 MIFP14174 115 aa8.07□□□□□ -1.12
SREBF1-209ENST00000470247 FOXA3P55318 350 aaPredicted RBP8.07□□□□□ -1.12
SREBF1-209ENST00000470247 TCL1AP56279 114 aa8.07□□□□□ -1.12
SREBF1-209ENST00000470247 ZNF493Q6ZR52 646 aa8.07□□□□□ -1.12
SREBF1-209ENST00000470247 SVBPQ8N300 66 aa8.07□□□□□ -1.12
SREBF1-209ENST00000470247 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
SREBF1-209ENST00000470247 MUC4Q99102 2169 aa8.07□□□□□ -1.12
SREBF1-209ENST00000470247 TRGV11A0A075B6L2 103 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 A0A087WWC5 75 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 A8MWL6 223 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 SNAI2O43623 268 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 MT-ND4LP03901 98 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 ARMS2P0C7Q2 107 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 RPS20P60866 119 aaKnown RBP8.06□□□□□ -1.12
SREBF1-209ENST00000470247 TSKUQ8WUA8 353 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 C16orf74Q96GX8 76 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 IL36BQ9NZH7 164 aa8.06□□□□□ -1.12
SREBF1-209ENST00000470247 SMIM27A0A1W2PRY6 76 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 H3BVH4 76 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 PPP1R2P9O14990 202 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 DEFB4AO15263 64 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 SNAPINO95295 136 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 OR5AL1P0C617 328 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 MED14OSP0DP75 135 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 ASIPP42127 132 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 DAZ2Q13117 558 aaKnown RBP8.05□□□□□ -1.12
SREBF1-209ENST00000470247 RHEBQ15382 184 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 CTDSP1Q9GZU7 261 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 TMEM242Q9NWH2 141 aa8.05□□□□□ -1.12
SREBF1-209ENST00000470247 XKRY2A2RUG3 117 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 FAM231BA6NCW3 169 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 NHLRC4P0CG21 123 aaPredicted RBP8.04□□□□□ -1.12
SREBF1-209ENST00000470247 ZNF415Q09FC8 603 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 LYZL1Q6UWQ5 148 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 LINC00612Q8N6U2 182 aa8.04□□□□□ -1.12
SREBF1-209ENST00000470247 FER1L6-AS1Q8NA97 138 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms