RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 IGF2RP11717 2491 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 ATRXP46100 2492 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 TRBV25-1A0A075B6N4 114 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 TRAV12-1A0A0B4J245 112 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 TRAV21A0A0B4J279 112 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 TRBV12-3P01733 135 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 USMG5Q96IX5 58 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 CHAC1Q9BUX1 264 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 TM2D2Q9BX73 214 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 LINC00527Q9UJ94 153 aa10.35□□□□□ -0.75
BRCA1-209ENST00000470026 A0A1W2PPM0 123 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 K7EMI3 77 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 IGHG2P01859 326 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 GTSCR1Q86UQ5 136 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 C20orf78Q9BR46 151 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 TTTY13Q9BZ97 58 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 TRAV40A0A0B4J280 105 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 SLC25A16P16260 332 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 FXYD2P54710 66 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
BRCA1-209ENST00000470026 PHLDA1Q8WV24 401 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-209ENST00000470026 CACNA1BQ00975 2339 aa10.33□□□□□ -0.75
BRCA1-209ENST00000470026 ABCA2Q9BZC7 2435 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 RASL10AQ92737 203 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 SPTBN1Q01082 2364 aaKnown RBP10.33□□□□□ -0.76
BRCA1-209ENST00000470026 IGHV3OR16-10A0A075B7F0 116 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 A6NDX4 124 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 M0R381 172 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 PLNP26678 52 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 OR5A1Q8NGJ0 315 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 DPH3P1Q9H4G8 78 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 TMEM160Q9NX00 188 aa10.33□□□□□ -0.76
BRCA1-209ENST00000470026 K7ERU9 68 aa10.32□□□□□ -0.76
BRCA1-209ENST00000470026 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
BRCA1-209ENST00000470026 LY6DQ14210 128 aa10.32□□□□□ -0.76
BRCA1-209ENST00000470026 TAL2Q16559 108 aa10.32□□□□□ -0.76
BRCA1-209ENST00000470026 ORMDL2Q53FV1 153 aa10.32□□□□□ -0.76
BRCA1-209ENST00000470026 BRD3OSQ6XYD6 125 aa10.32□□□□□ -0.76
BRCA1-209ENST00000470026 TOMM6Q96B49 74 aa10.32□□□□□ -0.76
BRCA1-209ENST00000470026 IGHV4-61A0A0C4DH41 118 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 NXPH4O95158 308 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 ASIPP42127 132 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 C21orf62-AS1Q17RA5 79 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 RNF151Q2KHN1 245 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 CEND1Q8N111 149 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 MAPKAPK5-AS1Q8N8E1 139 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 COL6A6A6NMZ7 2263 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 F8VRH5 84 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 LINC01619G3V211 115 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-209ENST00000470026 GCSHP23434 173 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 ANXA2RQ3ZCQ2 193 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 NEGR1Q7Z3B1 354 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 RAB37Q96AX2 223 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 NAA38Q9BRA0 125 aaKnown RBP10.31□□□□□ -0.76
BRCA1-209ENST00000470026 PRORYQ9H606 182 aa10.31□□□□□ -0.76
BRCA1-209ENST00000470026 H7C1H1 209 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 IGLV1-40P01703 118 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 IGHV4-38-2P0DP08 117 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
BRCA1-209ENST00000470026 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 SAMD5Q5TGI4 173 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 NEXN-AS1Q8NBZ9 246 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 C10orf105Q8TEF2 133 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 PIMREGQ9BSJ6 248 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 SPCS1Q9Y6A9 102 aa10.3□□□□□ -0.76
BRCA1-209ENST00000470026 FABP2P12104 132 aa10.29□□□□□ -0.76
BRCA1-209ENST00000470026 KLK15Q9H2R5 256 aa10.29□□□□□ -0.76
BRCA1-209ENST00000470026 NDUFS8O00217 210 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 DEFB1P60022 68 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 CFHR3Q02985 330 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 ZNF580Q9UK33 172 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 J3KRW8 73 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 PPP1R17O96001 155 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 S100A4P26447 101 aaKnown RBP10.28□□□□□ -0.76
BRCA1-209ENST00000470026 RPL32P62910 135 aaKnown RBP10.28□□□□□ -0.76
BRCA1-209ENST00000470026 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-209ENST00000470026 RPL39LQ96EH5 51 aaKnown RBP10.28□□□□□ -0.76
BRCA1-209ENST00000470026 SCGB3A1Q96QR1 104 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 SPOCK3Q9BQ16 436 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 VPS25Q9BRG1 176 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 RHPN1-AS1Q9BWJ2 59 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 KIF25-AS1Q9Y6Z4 181 aa10.28□□□□□ -0.76
BRCA1-209ENST00000470026 KLLNB2CW77 178 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 H3BUX3 64 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 SAP30O75446 220 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 GNLYP22749 145 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 LINC00315P59091 139 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 IGHV4OR15-8A0A075B7B6 117 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 A0A087WW49 117 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 F6UB75 175 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 K7EMT4 169 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 SPRY2O43597 315 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 IGHV3-11P01762 117 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 RNASE4P34096 147 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms