RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 KNCNA6PVL3 124 aa13.49□□□□□ -0.25
SMC4-211ENST00000469858 ODF3Q96PU9 254 aa13.49□□□□□ -0.25
SMC4-211ENST00000469858 MAP6D1Q9H9H5 199 aa13.49□□□□□ -0.25
SMC4-211ENST00000469858 SRIP30626 198 aa13.48□□□□□ -0.25
SMC4-211ENST00000469858 LEPP41159 167 aa13.48□□□□□ -0.25
SMC4-211ENST00000469858 ZNF124Q15973 351 aa13.48□□□□□ -0.25
SMC4-211ENST00000469858 COA6Q5JTJ3 125 aaKnown RBP13.48□□□□□ -0.25
SMC4-211ENST00000469858 HIST3H2BBQ8N257 126 aa13.48□□□□□ -0.25
SMC4-211ENST00000469858 ZNF256Q9Y2P7 627 aaPredicted RBP13.48□□□□□ -0.25
SMC4-211ENST00000469858 A0A1B0GW15 77 aa13.47□□□□□ -0.25
SMC4-211ENST00000469858 M0R2Z0 102 aa13.47□□□□□ -0.25
SMC4-211ENST00000469858 PF4P02776 101 aa13.47□□□□□ -0.25
SMC4-211ENST00000469858 S100A8P05109 93 aa13.47□□□□□ -0.25
SMC4-211ENST00000469858 IFITM10A6NMD0 228 aa13.46□□□□□ -0.25
SMC4-211ENST00000469858 SPINK13Q1W4C9 94 aa13.46□□□□□ -0.25
SMC4-211ENST00000469858 ANXA2RQ3ZCQ2 193 aa13.46□□□□□ -0.25
SMC4-211ENST00000469858 TRAV12-2A0A075B6T6 113 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 TRAV12-3A0A0B4J271 114 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 F2Z2F3 143 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 HLA-DRB4P13762 266 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 NTF3P20783 257 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 S100A2P29034 98 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 CDKN1BP46527 198 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 TWIST1Q15672 202 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 HLA-DRB4X5D2U9 266 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 C7orf71A4D174 169 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 TSPOP30536 169 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
SMC4-211ENST00000469858 H3BVH4 76 aa13.44□□□□□ -0.26
SMC4-211ENST00000469858 AMTNQ6UX39 209 aa13.44□□□□□ -0.26
SMC4-211ENST00000469858 GATD1Q8NB37 220 aa13.44□□□□□ -0.26
SMC4-211ENST00000469858 CNFNQ9BYD5 112 aa13.44□□□□□ -0.26
SMC4-211ENST00000469858 TP53TG3Q9ULZ0 132 aa13.44□□□□□ -0.26
SMC4-211ENST00000469858 H3BMM0 161 aa13.43□□□□□ -0.26
SMC4-211ENST00000469858 BAGE3Q86Y29 109 aa13.43□□□□□ -0.26
SMC4-211ENST00000469858 TIMM8BQ9Y5J9 83 aaPredicted RBP13.43□□□□□ -0.26
SMC4-211ENST00000469858 LOC102724200A0A096LPH7 203 aaPredicted RBP13.43□□□□□ -0.26
SMC4-211ENST00000469858 FXYD7P58549 80 aa13.43□□□□□ -0.26
SMC4-211ENST00000469858 Q0VG73 95 aa13.43□□□□□ -0.26
SMC4-211ENST00000469858 ODF3L2Q3SX64 289 aa13.43□□□□□ -0.26
SMC4-211ENST00000469858 ZNF493Q6ZR52 646 aa13.43□□□□□ -0.26
SMC4-211ENST00000469858 OR10AG1Q8NH19 301 aa13.43□□□□□ -0.26
SMC4-211ENST00000469858 ALKBH7Q9BT30 221 aaPredicted RBP13.43□□□□□ -0.26
SMC4-211ENST00000469858 MSRB1Q9NZV6 116 aa13.43□□□□□ -0.26
SMC4-211ENST00000469858 IGLV1-51P01701 117 aa13.42□□□□□ -0.26
SMC4-211ENST00000469858 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
SMC4-211ENST00000469858 OR10J3Q5JRS4 329 aa13.42□□□□□ -0.26
SMC4-211ENST00000469858 FAM159AQ6UWV7 190 aa13.42□□□□□ -0.26
SMC4-211ENST00000469858 LINC00482Q8N8I6 264 aa13.42□□□□□ -0.26
SMC4-211ENST00000469858 GNRH2O43555 120 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 ZNF324O75467 553 aaPredicted RBP13.41□□□□□ -0.26
SMC4-211ENST00000469858 OR5AL1P0C617 328 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 FABP4P15090 132 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 ASIPP42127 132 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 JMJD1CQ15652 2540 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 SNAI2O43623 268 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 NUPR1O60356 82 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 SERF1AO75920 110 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 IQCJQ1A5X6 159 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 C18orf32Q8TCD1 76 aa13.41□□□□□ -0.26
SMC4-211ENST00000469858 NIPBLQ6KC79 2804 aaeCLIP13.41□□□□□ -0.265e-8■■■■■ 34
SMC4-211ENST00000469858 RBMY1BA6NDE4 496 aaKnown RBP13.4□□□□□ -0.26
SMC4-211ENST00000469858 RBMY1EA6NEQ0 496 aaKnown RBP13.4□□□□□ -0.26
SMC4-211ENST00000469858 A8MTW9 85 aa13.4□□□□□ -0.26
SMC4-211ENST00000469858 RBMY1DP0C7P1 496 aaKnown RBP13.4□□□□□ -0.26
SMC4-211ENST00000469858 LINC00310P59036 64 aa13.4□□□□□ -0.26
SMC4-211ENST00000469858 AMN1Q8IY45 258 aa13.4□□□□□ -0.26
SMC4-211ENST00000469858 HIST1H2BLQ99880 126 aa13.4□□□□□ -0.26
SMC4-211ENST00000469858 CITED1Q99966 193 aa13.4□□□□□ -0.26
SMC4-211ENST00000469858 OR11H12B2RN74 326 aa13.4□□□□□ -0.27
SMC4-211ENST00000469858 SPANXN1Q5VSR9 72 aa13.4□□□□□ -0.27
SMC4-211ENST00000469858 FAM104BQ5XKR9 115 aa13.39□□□□□ -0.27
SMC4-211ENST00000469858 KCNS1Q96KK3 526 aa13.39□□□□□ -0.27
SMC4-211ENST00000469858 RCHY1Q96PM5 261 aa13.39□□□□□ -0.27
SMC4-211ENST00000469858 SPRY2O43597 315 aa13.38□□□□□ -0.27
SMC4-211ENST00000469858 AMBPP02760 352 aa13.38□□□□□ -0.27
SMC4-211ENST00000469858 CD7P09564 240 aa13.38□□□□□ -0.27
SMC4-211ENST00000469858 TMEM191AQ9H0A3 160 aa13.38□□□□□ -0.27
SMC4-211ENST00000469858 CACNG7P62955 275 aa13.38□□□□□ -0.27
SMC4-211ENST00000469858 OR10D4PQ8NGN7 298 aa13.38□□□□□ -0.27
SMC4-211ENST00000469858 OR2K2Q8NGT1 345 aa13.38□□□□□ -0.27
SMC4-211ENST00000469858 RNASE3P12724 160 aaKnown RBP13.37□□□□□ -0.27
SMC4-211ENST00000469858 PHLDA3Q9Y5J5 127 aa13.37□□□□□ -0.27
SMC4-211ENST00000469858 CRXO43186 299 aaPredicted RBP13.36□□□□□ -0.27
SMC4-211ENST00000469858 TMEM18Q96B42 140 aa13.36□□□□□ -0.27
SMC4-211ENST00000469858 PACRGQ96M98 296 aaPredicted RBP13.36□□□□□ -0.27
SMC4-211ENST00000469858 IGHV4-4A0A075B6R2 117 aa13.36□□□□□ -0.27
SMC4-211ENST00000469858 M0R381 172 aa13.36□□□□□ -0.27
SMC4-211ENST00000469858 MED14OSP0DP75 135 aa13.36□□□□□ -0.27
SMC4-211ENST00000469858 TDRG1Q3Y452 100 aa13.36□□□□□ -0.27
SMC4-211ENST00000469858 DNLZQ5SXM8 178 aa13.36□□□□□ -0.27
SMC4-211ENST00000469858 STHQ8IWL8 128 aa13.36□□□□□ -0.27
SMC4-211ENST00000469858 IGHV1OR15-1A0A075B7D0 117 aa13.35□□□□□ -0.27
SMC4-211ENST00000469858 RBMY1A1P0DJD3 496 aaKnown RBP13.35□□□□□ -0.27
SMC4-211ENST00000469858 RBMY1CP0DJD4 496 aa13.35□□□□□ -0.27
SMC4-211ENST00000469858 RBMY1FQ15415 496 aaKnown RBP13.35□□□□□ -0.27
SMC4-211ENST00000469858 MRPL51Q4U2R6 128 aaKnown RBP13.35□□□□□ -0.27
SMC4-211ENST00000469858 SCRT2Q9NQ03 307 aa13.35□□□□□ -0.27
SMC4-211ENST00000469858 D6R8Y8 96 aa13.34□□□□□ -0.27
SMC4-211ENST00000469858 ESDP10768 282 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms