RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 CD5LO43866 347 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 AVPP01185 164 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 PF4V1P10720 104 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 ATP5J2P56134 94 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 ODF1Q14990 250 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 TMEM97Q5BJF2 176 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 PCP2Q8IVA1 136 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 USP9YO00507 2555 aaPredicted RBP12.9□□□□□ -0.34
CBX6-203ENST00000469420 IGKV3-7A0A075B6H7 116 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 SPRY2O43597 315 aa12.9□□□□□ -0.34
CBX6-203ENST00000469420 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
CBX6-203ENST00000469420 RPL11P62913 178 aaKnown RBP12.89□□□□□ -0.35
CBX6-203ENST00000469420 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
CBX6-203ENST00000469420 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
CBX6-203ENST00000469420 OR4X2Q8NGF9 303 aa12.89□□□□□ -0.35
CBX6-203ENST00000469420 OR10J6PQ8NGY7 276 aa12.89□□□□□ -0.35
CBX6-203ENST00000469420 USMG5Q96IX5 58 aa12.89□□□□□ -0.35
CBX6-203ENST00000469420 ZNF462Q96JM2 2506 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 F6UB75 175 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 NDUFS8O00217 210 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 PRSS1P07477 247 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 MSMBP08118 114 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 MXRA5Q9NR99 2828 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 H3BUA1 57 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 LINC00477Q96M19 166 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 FOXC2Q99958 501 aa12.88□□□□□ -0.35
CBX6-203ENST00000469420 LRRK2Q5S007 2527 aa12.87□□□□□ -0.35
CBX6-203ENST00000469420 A1L4Q6 167 aa12.87□□□□□ -0.35
CBX6-203ENST00000469420 IGKV2D-26A0A0A0MRZ7 120 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 C7orf71A4D174 169 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 M0R381 172 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 OVOL1O14753 267 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 SEC11AP67812 179 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 KIR3DS1Q14943 382 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 AMMECR1LQ6DCA0 310 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 OR9G4Q8NGQ1 327 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 ZMAT4Q9H898 229 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 FAM208BQ5VWN6 2430 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 TRAV8-6A0A0B4J262 113 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 TRAV21A0A0B4J279 112 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 TMEM8BA6NDV4 472 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 SMIM17P0DL12 118 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 EDN2P20800 178 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
CBX6-203ENST00000469420 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
CBX6-203ENST00000469420 BRI3O95415 125 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 LAGE3Q14657 143 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 TMEM95Q3KNT9 176 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 ADAMTSL5Q6ZMM2 481 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 RHPN1-AS1Q9BWJ2 59 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 TTTY13Q9BZ97 58 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 HHLA3Q9XRX5 114 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 UBR5O95071 2799 aaPredicted RBP12.85□□□□□ -0.35
CBX6-203ENST00000469420 PRSS47A8MTI9 375 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 PRB1P04280 392 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 HSD52Q0P140 79 aa12.85□□□□□ -0.35
CBX6-203ENST00000469420 IGLV1-40P01703 118 aa12.84□□□□□ -0.35
CBX6-203ENST00000469420 IGKCP01834 107 aa12.84□□□□□ -0.35
CBX6-203ENST00000469420 SRD5A1P18405 259 aa12.84□□□□□ -0.35
CBX6-203ENST00000469420 S100A4P26447 101 aaKnown RBP12.84□□□□□ -0.35
CBX6-203ENST00000469420 ANXA2RQ3ZCQ2 193 aa12.84□□□□□ -0.35
CBX6-203ENST00000469420 RNASE4P34096 147 aaKnown RBP12.84□□□□□ -0.35
CBX6-203ENST00000469420 MRAP2Q96G30 205 aa12.84□□□□□ -0.35
CBX6-203ENST00000469420 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
CBX6-203ENST00000469420 SPOCK3Q9BQ16 436 aa12.84□□□□□ -0.35
CBX6-203ENST00000469420 PEF1Q9UBV8 284 aaKnown RBP12.84□□□□□ -0.35
CBX6-203ENST00000469420 SIVA1O15304 175 aa12.83□□□□□ -0.36
CBX6-203ENST00000469420 ATP5LO75964 103 aa12.83□□□□□ -0.36
CBX6-203ENST00000469420 ASIPP42127 132 aa12.83□□□□□ -0.36
CBX6-203ENST00000469420 CFHR3Q02985 330 aa12.82□□□□□ -0.36
CBX6-203ENST00000469420 GTSCR1Q86UQ5 136 aa12.82□□□□□ -0.36
CBX6-203ENST00000469420 SMIM2Q9BVW6 85 aa12.82□□□□□ -0.36
CBX6-203ENST00000469420 DAZ1Q9NQZ3 744 aaKnown RBP12.82□□□□□ -0.36
CBX6-203ENST00000469420 K7EP13 123 aa12.82□□□□□ -0.36
CBX6-203ENST00000469420 DPM2O94777 84 aa12.82□□□□□ -0.36
CBX6-203ENST00000469420 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
CBX6-203ENST00000469420 MRPL35Q9NZE8 188 aaKnown RBP12.82□□□□□ -0.36
CBX6-203ENST00000469420 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
CBX6-203ENST00000469420 ZC2HC1BQ5TFG8 222 aa12.81□□□□□ -0.36
CBX6-203ENST00000469420 PHLDA3Q9Y5J5 127 aa12.81□□□□□ -0.36
CBX6-203ENST00000469420 A6NDN8 102 aa12.81□□□□□ -0.36
CBX6-203ENST00000469420 GNRH2O43555 120 aa12.81□□□□□ -0.36
CBX6-203ENST00000469420 MYOZ3Q8TDC0 251 aa12.81□□□□□ -0.36
CBX6-203ENST00000469420 RASL10AQ92737 203 aa12.81□□□□□ -0.36
CBX6-203ENST00000469420 RPL39LQ96EH5 51 aaKnown RBP12.81□□□□□ -0.36
CBX6-203ENST00000469420 TMEM160Q9NX00 188 aa12.81□□□□□ -0.36
CBX6-203ENST00000469420 SRSF1Q07955 248 aaKnown RBP eCLIP12.8□□□□□ -0.36
CBX6-203ENST00000469420 DPH3P1Q9H4G8 78 aa12.8□□□□□ -0.36
CBX6-203ENST00000469420 DOPEY2Q9Y3R5 2298 aa12.8□□□□□ -0.36
CBX6-203ENST00000469420 ABCA12Q86UK0 2595 aa12.8□□□□□ -0.36
CBX6-203ENST00000469420 MGPP08493 103 aa12.8□□□□□ -0.36
CBX6-203ENST00000469420 APRG1Q8IVJ8 170 aa12.8□□□□□ -0.36
CBX6-203ENST00000469420 JMJD8Q96S16 334 aa12.8□□□□□ -0.36
CBX6-203ENST00000469420 NAA38Q9BRA0 125 aaKnown RBP12.8□□□□□ -0.36
CBX6-203ENST00000469420 SMPXQ9UHP9 88 aa12.8□□□□□ -0.36
CBX6-203ENST00000469420 PTPN13Q12923 2485 aa12.79□□□□□ -0.36
CBX6-203ENST00000469420 B4DSR2 109 aa12.79□□□□□ -0.36
CBX6-203ENST00000469420 RNASE3P12724 160 aaKnown RBP12.79□□□□□ -0.36
CBX6-203ENST00000469420 SUMO2P61956 95 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms