RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 AGRNO00468 2067 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 GON4LQ3T8J9 2241 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 IGLV2-18A0A075B6J9 118 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 IGHV4-4A0A075B6R2 117 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 TRAV13-1A0A0B4J241 112 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 IGHV5-51A0A0C4DH38 117 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 A0A0J9YW62 118 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 A0A0J9YY99 117 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 SDHAF1A6NFY7 115 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 C11orf86A6NJI1 115 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 M0R381 172 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 PLAUP00749 431 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 IGLV2-11P01706 119 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 IGHV3-30P01768 117 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 IGHV3-33P01772 117 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 RFPL3SP0C7P2 107 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 IGHV3-30-5P0DP03 117 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 COX6A1P12074 109 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 COX6B1P14854 86 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 PRDX2P32119 198 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 SSR4P51571 173 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 SUMO2P61956 95 aaKnown RBP3.75□□□□□ -1.81
SF3B1-207ENST00000468925 MRPS21P82921 87 aaKnown RBP3.75□□□□□ -1.81
SF3B1-207ENST00000468925 HOXA4Q00056 320 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-207ENST00000468925 CFHR1Q03591 330 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 LOXL1Q08397 574 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-207ENST00000468925 ZNF415Q09FC8 603 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 FAM201AQ5SY85 155 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 GOLT1AQ6ZVE7 132 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 IL17RELQ6ZVW7 336 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 PRIMA1Q86XR5 153 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 NEXN-AS1Q8NBZ9 246 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 TMEM167AQ8TBQ9 72 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 TOMM6Q96B49 74 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 FLYWCH2Q96CP2 140 aaKnown RBP3.75□□□□□ -1.81
SF3B1-207ENST00000468925 TMEM141Q96I45 108 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 METTL26Q96S19 204 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 SLC50A1Q9BRV3 221 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 LINC00574Q9H8X3 128 aa3.75□□□□□ -1.81
SF3B1-207ENST00000468925 PTPRBP23467 1997 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 TRBV19A0A075B6N1 114 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 RBAKDNA6NC62 111 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 C10orf142B7Z368 130 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 PRYO14603 147 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 WNT9BO14905 357 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 NDUFA3O95167 84 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 ELANEP08246 267 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 CD24P25063 80 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-207ENST00000468925 SEC61GP60059 68 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 HIST1H4AP62805 103 aaKnown RBP3.74□□□□□ -1.81
SF3B1-207ENST00000468925 VMA21Q3ZAQ7 101 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 S100A7L2Q5SY68 101 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 Q6ZQT7 251 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 ZNF575Q86XF7 245 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 C8orf31Q8N9H6 132 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 SCGB3A1Q96QR1 104 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 OVOL2Q9BRP0 275 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 AGPAT4-IT1Q9H0P7 198 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 REV3LO60673 3130 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 XIRP2A4UGR9 3374 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 DYSFO75923 2080 aa3.74□□□□□ -1.81
SF3B1-207ENST00000468925 MAST4O15021 2626 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 IGKV1D-37A0A075B6S9 117 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 TRAV12-2A0A075B6T6 113 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 TMSB15BA0A087X1C1 80 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 TRAV3A0A0B4J244 114 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 LOC107984640A0A0U1RRK4 108 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 TINCRA0A1B0GVN0 87 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 OOSP1A8MZH6 123 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 CDX4O14627 284 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-207ENST00000468925 PROP1O75360 226 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 IGLV3-19P01714 112 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 LGALS3P17931 250 aaKnown RBP3.73□□□□□ -1.81
SF3B1-207ENST00000468925 DLX1P56177 255 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 NXPH1P58417 271 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 KRTAP10-9P60411 292 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 NPC2P61916 151 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 RPL18AQ02543 176 aaKnown RBP3.73□□□□□ -1.81
SF3B1-207ENST00000468925 KLRB1Q12918 225 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 ZNF672Q499Z4 452 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-207ENST00000468925 DUX4L9Q6RFH8 374 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-207ENST00000468925 MDP1Q86V88 176 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 TMEM263Q8WUH6 116 aaKnown RBP3.73□□□□□ -1.81
SF3B1-207ENST00000468925 PATE1Q8WXA2 126 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 RNF185Q96GF1 192 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 SRXN1Q9BYN0 137 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 JPT2Q9H910 190 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 LINC00527Q9UJ94 153 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 SERP1Q9Y6X1 66 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 NOTCH4Q99466 2003 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 DCHS1Q96JQ0 3298 aa3.73□□□□□ -1.81
SF3B1-207ENST00000468925 UNC13CQ8NB66 2214 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 IGHV3-15A0A0B4J1V0 119 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 A0A0J9YXY3 114 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 TEX49A0A1B0GTD5 131 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 LST1O00453 97 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms