RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 GAGE12BA1L429 117 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 FABP5P3A8MUU1 101 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 GAGE7O76087 117 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 GAGE12FP0CL80 117 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 GAGE12GP0CL81 117 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 GAGE12IP0CL82 117 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 HTN3P15516 51 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 MDFICQ9P1T7 246 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 RYR3Q15413 4870 aa14.12□□□□□ -0.15
NPHP4-206ENST00000468253 UBE2G1P62253 170 aa14.11□□□□□ -0.15
NPHP4-206ENST00000468253 Q6ZTI0 123 aa14.11□□□□□ -0.15
NPHP4-206ENST00000468253 TMEM183AQ8IXX5 376 aa14.11□□□□□ -0.15
NPHP4-206ENST00000468253 SDF2L1Q9HCN8 221 aa14.11□□□□□ -0.15
NPHP4-206ENST00000468253 GNG13Q9P2W3 67 aa14.11□□□□□ -0.15
NPHP4-206ENST00000468253 RYR2Q92736 4967 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 TRGV1A0A0A0MS02 117 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 F5H768 121 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 GNRH2O43555 120 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 LY6G6CO95867 125 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 LTAP01374 205 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 TAGLN2P37802 199 aaKnown RBP14.1□□□□□ -0.15
NPHP4-206ENST00000468253 NKX2-5P52952 324 aaPredicted RBP14.1□□□□□ -0.15
NPHP4-206ENST00000468253 BLOC1S1P78537 153 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 Q86TA4 180 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 RASL10AQ92737 203 aa14.1□□□□□ -0.15
NPHP4-206ENST00000468253 IGHV3-16A0A0C4DH30 117 aa14.09□□□□□ -0.15
NPHP4-206ENST00000468253 AKR1C3P42330 323 aa14.09□□□□□ -0.15
NPHP4-206ENST00000468253 C15orf53Q8NAA6 179 aa14.09□□□□□ -0.15
NPHP4-206ENST00000468253 C11orf21Q9P2W6 132 aa14.09□□□□□ -0.15
NPHP4-206ENST00000468253 NAGKQ9UJ70 344 aa14.09□□□□□ -0.15
NPHP4-206ENST00000468253 VPS13DQ5THJ4 4388 aa14.08□□□□□ -0.16
NPHP4-206ENST00000468253 TRGV2A0A075B6R0 118 aa14.08□□□□□ -0.16
NPHP4-206ENST00000468253 IFNA1P01562 189 aa14.08□□□□□ -0.16
NPHP4-206ENST00000468253 TMEM88Q6PEY1 159 aa14.08□□□□□ -0.16
NPHP4-206ENST00000468253 TYMSP04818 313 aa14.07□□□□□ -0.16
NPHP4-206ENST00000468253 ALKAL2Q6UX46 152 aa14.07□□□□□ -0.16
NPHP4-206ENST00000468253 LYPD6BQ8NI32 183 aa14.07□□□□□ -0.16
NPHP4-206ENST00000468253 C11orf52Q96A22 123 aa14.07□□□□□ -0.16
NPHP4-206ENST00000468253 BOLA1Q9Y3E2 137 aa14.07□□□□□ -0.16
NPHP4-206ENST00000468253 SCO2A0A1W2PP80 73 aa14.06□□□□□ -0.16
NPHP4-206ENST00000468253 H3BNG1 76 aa14.06□□□□□ -0.16
NPHP4-206ENST00000468253 M0R2P5 195 aa14.06□□□□□ -0.16
NPHP4-206ENST00000468253 P0DMU3 169 aa14.06□□□□□ -0.16
NPHP4-206ENST00000468253 FAM231AP0DMU4 169 aa14.06□□□□□ -0.16
NPHP4-206ENST00000468253 FAM231CP0DMU5 169 aa14.06□□□□□ -0.16
NPHP4-206ENST00000468253 CRIP1P50238 77 aa14.06□□□□□ -0.16
NPHP4-206ENST00000468253 PTH2Q96A98 100 aa14.06□□□□□ -0.16
NPHP4-206ENST00000468253 PDE6DO43924 150 aa14.05□□□□□ -0.16
NPHP4-206ENST00000468253 SLAQ13239 276 aa14.05□□□□□ -0.16
NPHP4-206ENST00000468253 ZNF674Q2M3X9 581 aa14.05□□□□□ -0.16
NPHP4-206ENST00000468253 FAM162BQ5T6X4 162 aa14.05□□□□□ -0.16
NPHP4-206ENST00000468253 BAGE2Q86Y30 109 aa14.05□□□□□ -0.16
NPHP4-206ENST00000468253 ZC2HC1AQ96GY0 325 aa14.05□□□□□ -0.16
NPHP4-206ENST00000468253 MLST8Q9BVC4 326 aa14.05□□□□□ -0.16
NPHP4-206ENST00000468253 VAX2Q9UIW0 290 aa14.05□□□□□ -0.16
NPHP4-206ENST00000468253 MEF2BQ02080 365 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-206ENST00000468253 OR5I1Q13606 314 aa14.04□□□□□ -0.16
NPHP4-206ENST00000468253 MRPL16Q9NX20 251 aaKnown RBP14.04□□□□□ -0.16
NPHP4-206ENST00000468253 IGKV3D-20A0A0C4DH25 116 aa14.03□□□□□ -0.16
NPHP4-206ENST00000468253 BCL2P10415 239 aa14.03□□□□□ -0.16
NPHP4-206ENST00000468253 HOXA5P20719 270 aa14.03□□□□□ -0.16
NPHP4-206ENST00000468253 DNLZQ5SXM8 178 aa14.03□□□□□ -0.16
NPHP4-206ENST00000468253 ORM1P02763 201 aa14.02□□□□□ -0.17
NPHP4-206ENST00000468253 RPL35P42766 123 aaKnown RBP14.02□□□□□ -0.17
NPHP4-206ENST00000468253 RNF212Q495C1 297 aa14.02□□□□□ -0.17
NPHP4-206ENST00000468253 C9orf85Q96MD7 179 aa14.02□□□□□ -0.17
NPHP4-206ENST00000468253 KRBOX1C9JBD0 128 aa14.01□□□□□ -0.17
NPHP4-206ENST00000468253 SH2D1AO60880 128 aa14.01□□□□□ -0.17
NPHP4-206ENST00000468253 PIK3CD-AS1Q5SR53 167 aa14.01□□□□□ -0.17
NPHP4-206ENST00000468253 POM121L12Q8N7R1 296 aa14.01□□□□□ -0.17
NPHP4-206ENST00000468253 KMT2AQ03164 3969 aa14□□□□□ -0.17
NPHP4-206ENST00000468253 TRAV26-1A0A087WT03 109 aa14□□□□□ -0.17
NPHP4-206ENST00000468253 B4DEV8 164 aa14□□□□□ -0.17
NPHP4-206ENST00000468253 CIDEAO60543 219 aa14□□□□□ -0.17
NPHP4-206ENST00000468253 RNASE3P12724 160 aaKnown RBP14□□□□□ -0.17
NPHP4-206ENST00000468253 MUC4Q99102 2169 aa13.99□□□□□ -0.17
NPHP4-206ENST00000468253 HYDINQ4G0P3 5121 aa13.99□□□□□ -0.17
NPHP4-206ENST00000468253 FHL2Q14192 279 aa13.99□□□□□ -0.17
NPHP4-206ENST00000468253 LINC01559Q495D7 138 aa13.99□□□□□ -0.17
NPHP4-206ENST00000468253 ZNF575Q86XF7 245 aa13.99□□□□□ -0.17
NPHP4-206ENST00000468253 SMIM12Q96EX1 92 aa13.99□□□□□ -0.17
NPHP4-206ENST00000468253 PRO0255Q9UI72 69 aa13.99□□□□□ -0.17
NPHP4-206ENST00000468253 TRAV4A0A0B4J268 109 aa13.98□□□□□ -0.17
NPHP4-206ENST00000468253 NDUFS6O75380 124 aaKnown RBP13.98□□□□□ -0.17
NPHP4-206ENST00000468253 S100A4P26447 101 aaKnown RBP13.98□□□□□ -0.17
NPHP4-206ENST00000468253 ASIPP42127 132 aa13.98□□□□□ -0.17
NPHP4-206ENST00000468253 FAM3BP58499 235 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-206ENST00000468253 ZNF876PQ49A33 203 aa13.98□□□□□ -0.17
NPHP4-206ENST00000468253 MED9Q9NWA0 146 aa13.98□□□□□ -0.17
NPHP4-206ENST00000468253 IL36BQ9NZH7 164 aa13.98□□□□□ -0.17
NPHP4-206ENST00000468253 HHLA3Q9XRX5 114 aa13.98□□□□□ -0.17
NPHP4-206ENST00000468253 RBFOX3A6NFN3 312 aa13.97□□□□□ -0.17
NPHP4-206ENST00000468253 NUDT3O95989 172 aa13.97□□□□□ -0.17
NPHP4-206ENST00000468253 OR4C5Q8NGB2 326 aa13.97□□□□□ -0.17
NPHP4-206ENST00000468253 VSIG2Q96IQ7 327 aa13.97□□□□□ -0.17
NPHP4-206ENST00000468253 TEX261Q6UWH6 196 aa13.96□□□□□ -0.17
NPHP4-206ENST00000468253 NHLRC2Q8NBF2 726 aa13.96□□□□□ -0.17
NPHP4-206ENST00000468253 ZNF479Q96JC4 524 aa13.96□□□□□ -0.17
NPHP4-206ENST00000468253 DERL1Q9BUN8 251 aa13.96□□□□□ -0.17
NPHP4-206ENST00000468253 DNAH6Q9C0G6 4158 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms